RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 PRAMEF12O95522 483 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 CFHP08603 1231 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 CD19P15391 556 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 PLA2G4AP47712 749 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 ANO6Q4KMQ2 910 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 HECTD3Q5T447 861 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 PM20D1Q6GTS8 502 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 PIGZQ86VD9 579 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 YAF2Q8IY57 180 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 TFAP2BQ92481 460 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 NELL2Q99435 816 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 OSBPL6Q9BZF3 934 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 CYLDQ9NQC7 956 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 ARHGEF3Q9NR81 526 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 CLIC5Q9NZA1 410 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 CHORDC1Q9UHD1 332 aaPredicted RBP17.18■□□□□ 0.34
TNPO1-212ENST00000520850 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.18■□□□□ 0.34
TNPO1-212ENST00000520850 ARIH1Q9Y4X5 557 aaPredicted RBP17.18■□□□□ 0.34
TNPO1-212ENST00000520850 PATJQ8NI35 1801 aa17.18■□□□□ 0.34
TNPO1-212ENST00000520850 KRBA1A5PL33 1030 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 C2orf78A6NCI8 922 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 MED7O43513 233 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 CKMP06732 381 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 CDK11BP21127 795 aaKnown RBP17.17■□□□□ 0.34
TNPO1-212ENST00000520850 GDI1P31150 447 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 RPL34P49207 117 aaKnown RBP17.17■□□□□ 0.34
TNPO1-212ENST00000520850 ZNF165P49910 485 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 HSP90AA4PQ58FG1 418 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 KLHDC7AQ5VTJ3 777 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 DDX42Q86XP3 938 aaKnown RBP eCLIP17.17■□□□□ 0.34
TNPO1-212ENST00000520850 ARHGAP18Q8N392 663 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 ARL14EPQ8N8R7 260 aaPredicted RBP17.17■□□□□ 0.34
TNPO1-212ENST00000520850 STK32AQ8WU08 396 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 HSFY1Q96LI6 401 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 SLC22A12Q96S37 553 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 CYP2S1Q96SQ9 504 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 CDK5RAP1Q96SZ6 601 aaKnown RBP17.17■□□□□ 0.34
TNPO1-212ENST00000520850 FAM83CQ9BQN1 747 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 NAA15Q9BXJ9 866 aaKnown RBP17.17■□□□□ 0.34
TNPO1-212ENST00000520850 RNF38Q9H0F5 515 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 DNAJC12Q9UKB3 198 aa17.17■□□□□ 0.34
TNPO1-212ENST00000520850 FAM86C2PA6NEL3 165 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 MAN2B1O00754 1011 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 COPB1P53618 953 aaKnown RBP17.16■□□□□ 0.34
TNPO1-212ENST00000520850 BPIFB4P59827 614 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 PDE4CQ08493 712 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 MLF2Q15773 248 aaPredicted RBP17.16■□□□□ 0.34
TNPO1-212ENST00000520850 ZNF77Q15935 545 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 GOLGA7BQ2TAP0 167 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 FKBP15Q5T1M5 1219 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 APTXQ7Z2E3 356 aaKnown RBP17.16■□□□□ 0.34
TNPO1-212ENST00000520850 GPRIN1Q7Z2K8 1008 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 DHX40Q8IX18 779 aaKnown RBP17.16■□□□□ 0.34
TNPO1-212ENST00000520850 SIX5Q8N196 739 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 ST13P5Q8NFI4 369 aaPredicted RBP17.16■□□□□ 0.34
TNPO1-212ENST00000520850 ZNF606Q8WXB4 792 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 ZSWIM1Q9BR11 485 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 VPS16Q9H269 839 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 C8orf33Q9H7E9 229 aaPredicted RBP17.16■□□□□ 0.34
TNPO1-212ENST00000520850 TRPC7Q9HCX4 862 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 CCL26Q9Y258 94 aa17.16■□□□□ 0.34
TNPO1-212ENST00000520850 BECN2A8MW95 431 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 KRT5P13647 590 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 UCHL3P15374 230 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 PTK2Q05397 1052 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 USP4Q13107 963 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 GRM2Q14416 872 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 IQCB1Q15051 598 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 PDGFRLQ15198 375 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 ASTLQ6HA08 431 aaPredicted RBP17.15■□□□□ 0.34
TNPO1-212ENST00000520850 TADA2BQ86TJ2 420 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 SUGP1Q8IWZ8 645 aaKnown RBP17.15■□□□□ 0.34
TNPO1-212ENST00000520850 FAM71AQ8IYT1 594 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 ERGIC2Q96RQ1 377 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 PRRX2Q99811 253 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 STK33Q9BYT3 514 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 MFSD1Q9H3U5 465 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 CNGB3Q9NQW8 809 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 TAB2Q9NYJ8 693 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 GMIPQ9P107 970 aa17.15■□□□□ 0.34
TNPO1-212ENST00000520850 KANSL1LA0AUZ9 987 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 SYCE3A1L190 88 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 LGALS16A8MUM7 142 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 FOXN3O00409 490 aaPredicted RBP17.14■□□□□ 0.33
TNPO1-212ENST00000520850 COCHO43405 550 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 AOC1P19801 751 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 AVPR2P30518 371 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 GPD2P43304 727 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 IFRD2Q12894 506 aaPredicted RBP17.14■□□□□ 0.33
TNPO1-212ENST00000520850 CC2D1AQ6P1N0 951 aaPredicted RBP17.14■□□□□ 0.33
TNPO1-212ENST00000520850 GJB7Q6PEY0 223 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 AOPEPQ8N6M6 819 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 CSGALNACT1Q8TDX6 532 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 OSCP1Q8WVF1 389 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 LHX5Q9H2C1 402 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 LRRC4Q9HBW1 653 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 GKN1Q9NS71 199 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.14■□□□□ 0.33
TNPO1-212ENST00000520850 CA14Q9ULX7 337 aa17.14■□□□□ 0.33
TNPO1-212ENST00000520850 PCDHGC3Q9UN70 934 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms