RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SLC5A3P53794 718 aa20.84■□□□□ 0.93
PABPC1-215ENST00000520804 SEC13P55735 322 aa20.84■□□□□ 0.93
PABPC1-215ENST00000520804 SF3A2Q15428 464 aaKnown RBP20.84■□□□□ 0.93
PABPC1-215ENST00000520804 CCDC6Q16204 474 aa20.84■□□□□ 0.93
PABPC1-215ENST00000520804 C2orf27AQ580R0 203 aa20.84■□□□□ 0.93
PABPC1-215ENST00000520804 PLA2G2CQ5R387 149 aa20.84■□□□□ 0.93
PABPC1-215ENST00000520804 SNX30Q5VWJ9 437 aa20.84■□□□□ 0.93
PABPC1-215ENST00000520804 SV2AQ7L0J3 742 aa20.84■□□□□ 0.93
PABPC1-215ENST00000520804 ACOT1Q86TX2 421 aa20.84■□□□□ 0.93
PABPC1-215ENST00000520804 C12orf50Q8NA57 414 aaPredicted RBP20.84■□□□□ 0.93
PABPC1-215ENST00000520804 TAF4BQ92750 862 aa20.84■□□□□ 0.93
PABPC1-215ENST00000520804 DUSP15Q9H1R2 295 aaPredicted RBP20.84■□□□□ 0.93
PABPC1-215ENST00000520804 COMMD8Q9NX08 183 aa20.84■□□□□ 0.93
PABPC1-215ENST00000520804 E2F8A0AVK6 867 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 ANTXRLA6NF34 631 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 IKBKBO14920 756 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 AP1G2O75843 785 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 SLC6A11P48066 632 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 LIMK1P53667 647 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 AASDHQ4L235 1098 aaPredicted RBP20.83■□□□□ 0.93
PABPC1-215ENST00000520804 HECTD3Q5T447 861 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 CEP135Q66GS9 1140 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 RHBDF2Q6PJF5 856 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 TSTD1Q8NFU3 115 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 ZFRQ96KR1 1074 aaKnown RBP20.83■□□□□ 0.93
PABPC1-215ENST00000520804 SPATA32Q96LK8 384 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 KRT82Q9NSB4 513 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 TBC1D14Q9P2M4 693 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 TRAF3IP3Q9Y228 551 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 FRMD4BQ9Y2L6 1034 aa20.83■□□□□ 0.93
PABPC1-215ENST00000520804 FAM92AA1XBS5 289 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 DCLK1O15075 740 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 CALUO43852 315 aaPredicted RBP20.82■□□□□ 0.92
PABPC1-215ENST00000520804 ADH1CP00326 375 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 ASS1P00966 412 aaKnown RBP20.82■□□□□ 0.92
PABPC1-215ENST00000520804 ZDHHC11BP0C7U3 371 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 EIF2DP41214 584 aaKnown RBP20.82■□□□□ 0.92
PABPC1-215ENST00000520804 SYKP43405 635 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 TUBP50607 506 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 DGKEP52429 567 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 NDST1P52848 882 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 KRT85P78386 507 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 MRPS21P82921 87 aaKnown RBP20.82■□□□□ 0.92
PABPC1-215ENST00000520804 ELF2Q15723 593 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 PPM1JQ5JR12 505 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 C1orf220Q5T0J3 134 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 UNC93AQ86WB7 457 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 CRYBG2Q8N1P7 616 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 ZMIZ2Q8NF64 920 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 CHAMP1Q96JM3 812 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 PNKPQ96T60 521 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 SMOQ99835 787 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 GMIPQ9P107 970 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 HMGXB4Q9UGU5 601 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 MMP17Q9ULZ9 603 aa20.82■□□□□ 0.92
PABPC1-215ENST00000520804 FAM237AA0A1B0GTK4 181 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 MAPK13O15264 365 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 BEST1O76090 585 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 RHOBTB1O94844 696 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 ADRB1P08588 477 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 ADH5P11766 374 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 CCDC130P13994 396 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 MPLP40238 635 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 ASPAP45381 313 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 ORC1Q13415 861 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 SPOPLQ6IQ16 392 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 RASSF3Q86WH2 238 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 C12orf40Q86WS4 652 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 SLC2A14Q8TDB8 520 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 OTUB2Q96DC9 234 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 CCSER2Q9H7U1 834 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 CSNK1G1Q9HCP0 422 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 VPS45Q9NRW7 570 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 RXFP3Q9NSD7 469 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 ZDHHC9Q9Y397 364 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 SDK1Q7Z5N4 2213 aa20.81■□□□□ 0.92
PABPC1-215ENST00000520804 A0A0A0MRY4 1105 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 RHOBTB3O94955 611 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 KIF20AO95235 890 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 KAT7O95251 611 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 HLA-DRAP01903 254 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 PRR29P0C7W0 189 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 PIK3CAP42336 1068 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 VAMP7P51809 220 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 NDUFA8P51970 172 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 MESP2Q0VG99 397 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 CRY1Q16526 586 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 NFIL3Q16649 462 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 SFTPA1Q8IWL2 248 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 CCDC33Q8N5R6 958 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 C12orf29Q8N999 325 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 DDX1Q92499 740 aaKnown RBP20.8■□□□□ 0.92
PABPC1-215ENST00000520804 CCDC47Q96A33 483 aaKnown RBP20.8■□□□□ 0.92
PABPC1-215ENST00000520804 CNOT6LQ96LI5 555 aaKnown RBP20.8■□□□□ 0.92
PABPC1-215ENST00000520804 DUSP9Q99956 384 aaKnown RBP20.8■□□□□ 0.92
PABPC1-215ENST00000520804 SMOC1Q9H4F8 434 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 SH3BP1Q9Y3L3 701 aa20.8■□□□□ 0.92
PABPC1-215ENST00000520804 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.79■□□□□ 0.92
PABPC1-215ENST00000520804 APODP05090 189 aa20.79■□□□□ 0.92
PABPC1-215ENST00000520804 CHRM1P11229 460 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms