RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 NSUN2Q08J23 767 aaKnown RBP eCLIP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 PPP2R5EQ16537 467 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 SLC45A4Q5BKX6 768 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 ZC3H12AQ5D1E8 599 aaKnown RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 RAP1GAP2Q684P5 730 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 IPMKQ8NFU5 416 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 FAM172AQ8WUF8 416 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 ADGRA3Q8IWK6 1321 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 EIF3CLB5ME19 914 aaKnown RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 EBAG9O00559 213 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 GJB5O95377 273 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 MYBL1P10243 752 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 ARL2P36404 184 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TUBP50607 506 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 GRM2Q14416 872 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 SYTL3Q4VX76 610 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 NT5DC1Q5TFE4 455 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 DHX40Q8IX18 779 aaKnown RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 ZNF606Q8WXB4 792 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 CELF6Q96J87 481 aaKnown RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 VPS39Q96JC1 886 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 EIF3CQ99613 913 aaKnown RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TM6SF2Q9BZW4 377 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 SEMA6BQ9H3T3 888 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 NRDE2Q9H7Z3 1164 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 BFARQ9NZS9 450 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 AKAP7Q9P0M2 348 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 A0A1B0GUA9 196 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 RAMP2O60895 175 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 RTN2O75298 545 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 EPHX1P07099 455 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 KCNT1Q5JUK3 1230 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 ZBTB41Q5SVQ8 909 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 SPATA17Q96L03 361 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 ZNF518BQ9C0D4 1074 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 RAB17Q9H0T7 212 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 SCUBE2Q9NQ36 999 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 DNAJB4Q9UDY4 337 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 C3orf70A6NLC5 250 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 EFCAB8A8MWE9 144 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 CFAP99D6REC4 459 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 SYN3O14994 580 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBL1XO60907 577 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 LILRA4P59901 499 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 WDR5P61964 334 aaKnown RBP12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 SLC22A17Q8WUG5 538 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 RXFP2Q8WXD0 754 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 MTMR8Q96EF0 704 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 GTPBP2Q9BX10 602 aaKnown RBP12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 TRIM7Q9C029 511 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 CA14Q9ULX7 337 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 GOLGA8MH3BSY2 632 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 MYOGP15173 224 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 ZFXP17010 805 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 ECM1Q16610 540 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 DNAJB7Q7Z6W7 309 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 SLFN11Q7Z7L1 901 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 ZNF280BQ86YH2 543 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 BCO2Q9BYV7 579 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 SPATA6Q9NWH7 488 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 RIF1Q5UIP0 2472 aaKnown RBP12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 NHSQ6T4R5 1651 aa12.31□□□□□ -0.44
PCDHGB6-201ENST00000520790 A0A0B4J269 797 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 FGF19O95750 216 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 GALTP07902 379 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 PLA2G4AP47712 749 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 ARMCX6Q7L4S7 300 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 LRRC52Q8N7C0 313 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 IGSF21Q96ID5 467 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 FBXL18Q96ME1 805 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 PPP2R2CQ9Y2T4 447 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 SPTA1P02549 2419 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 IVLP07476 585 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 SESN2P58004 480 aaPredicted RBP12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 ERVK-21P61565 698 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 LPAL2Q16609 132 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 ERCC6LQ2NKX8 1250 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 ZNF284Q2VY69 593 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 KLHDC7AQ5VTJ3 777 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 PCGF5Q86SE9 256 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 TTC7BQ86TV6 843 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 PHACTR4Q8IZ21 702 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 TSTD1Q8NFU3 115 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 FBF1Q8TES7 1133 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 HMGB4Q8WW32 186 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D14Q9P2M4 693 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 CPQQ9Y646 472 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 SYF2O95926 243 aaKnown RBP12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 RB1P06400 928 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 ADRB2P07550 413 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 RALBP11234 206 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 TCP1P17987 556 aaKnown RBP12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 C21orf59P57076 290 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 FAM35AQ86V20 835 aa12.3□□□□□ -0.44
PCDHGB6-201ENST00000520790 CCDC170Q8IYT3 715 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms