RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	ITGA2B	P08514	1039 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	HGF	P14210	728 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PRKAG1	P54619	331 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	POLE2	P56282	527 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	GEN1	Q17RS7	908 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RABL3	Q5HYI8	236 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SP5	Q6BEB4	398 aa	Predicted RBP	4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	MZT2A	Q6P582	158 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	GATAD2A	Q86YP4	633 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SCAMP5	Q8TAC9	235 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CPT1C	Q8TCG5	803 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TMEM171	Q8WVE6	324 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	HELLS	Q9NRZ9	838 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	DNAJB11	Q9UBS4	358 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	DKK2	Q9UBU2	259 aa		4.14	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ZAR1L	A6NP61	321 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	IRAK2	O43187	625 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TRIAP1	O43715	76 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	NCR1	O76036	304 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RECQL4	O94761	1208 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ZNF202	O95125	648 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SRGAP2B	P0DMP2	458 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CKMT1A	P12532	417 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ZFP36	P26651	326 aa	Known RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CST5	P28325	142 aa	Predicted RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ADORA2A	P29274	412 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	NTSR1	P30989	418 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	UQCRC1	P31930	480 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TUBB3	Q13509	450 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CCNI	Q14094	377 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TOB2	Q14106	344 aa	Predicted RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ICE2	Q659A1	982 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	KLHL17	Q6TDP4	642 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RASGRP3	Q8IV61	690 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	HERC6	Q8IVU3	1022 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	C1orf210	Q8IVY1	113 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SLC15A3	Q8IY34	581 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SPPL3	Q8TCT6	385 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CACTIN	Q8WUQ7	758 aa	Known RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SNX19	Q92543	992 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RSC1A1	Q92681	617 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RILPL2	Q969X0	211 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TMEM125	Q96AQ2	219 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	UNKL	Q9H9P5	680 aa	Known RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	AKIP1	Q9NQ31	210 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PRDM8	Q9NQV8	689 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	KIF17	Q9P2E2	1029 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PDP2	Q9P2J9	529 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SERTAD3	Q9UJW9	196 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	HS3ST3A1	Q9Y663	406 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776		A0A1B0GVC2	190 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	EYA2	O00167	538 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CCNT2	O60583	730 aa	Known RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ACTL6B	O94805	426 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	LMNA	P02545	664 aa	Known RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ERBB2	P04626	1255 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CD6	P30203	668 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	GATM	P50440	423 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	BCAT1	P54687	386 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	REST	Q13127	1097 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CRHR2	Q13324	411 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	GRM4	Q14833	912 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FBXO47	Q5MNV8	452 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TMPRSS6	Q8IU80	811 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ABRA	Q8N0Z2	381 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	HIST1H2AA	Q96QV6	131 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ALOXE3	Q9BYJ1	711 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FSCN3	Q9NQT6	498 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	GGA3	Q9NZ52	723 aa		4.13	□□□□□ -1.75
EFCAB13-208	ENST00000520776	GAGE12B	A1L429	117 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	GAGE12H	A6NDE8	117 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RNASET2	O00584	256 aa	Known RBP	4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	NR4A1	P22736	598 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	KLRK1	P26718	216 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PRKAR1B	P31321	381 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ADD2	P35612	726 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PGD	P52209	483 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	VAV2	P52735	878 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TGFB2	P61812	414 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	AP2B1	P63010	937 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	GPS1	Q13098	491 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	LY6K	Q17RY6	165 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	BEAN1	Q3B7T3	259 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	LSM12	Q3MHD2	195 aa	Known RBP	4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CERCAM	Q5T4B2	595 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FTSJ3	Q8IY81	847 aa	Known RBP	4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SIMC1	Q8NDZ2	872 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SUN3	Q8TAQ9	357 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ABHD5	Q8WTS1	349 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	EXTL1	Q92935	676 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FUBP1	Q96AE4	644 aa	Known RBP	4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	FAM136A	Q96C01	138 aa		4.12	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RNF31	Q96EP0	1072 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms