RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 SLC26A9Q7LBE3 791 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 ARCQ7LC44 396 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 GPRIN1Q7Z2K8 1008 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 DAAM2Q86T65 1068 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 NT5DC3Q86UY8 548 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 SPATA2LQ8IUW3 424 aaPredicted RBP8.96□□□□□ -0.98
VAPB-206ENST00000520497 VPS52Q8N1B4 723 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 SCML4Q8N228 414 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 NIPA2Q8N8Q9 360 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 KLHL23Q8NBE8 558 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 FBXO22Q8NEZ5 403 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 JOSD2Q8TAC2 188 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 FEZF2Q8TBJ5 459 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 SPPL2BQ8TCT7 592 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 FNIP1Q8TF40 1166 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 C2orf15Q8WU43 125 aaKnown RBP8.96□□□□□ -0.98
VAPB-206ENST00000520497 CD101Q93033 1021 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 BTBD6Q96KE9 485 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 MCEEQ96PE7 176 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 KCNK16Q96T55 309 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 CLSTN3Q9BQT9 956 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 PLVAPQ9BX97 442 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 ZBP1Q9H171 429 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 PRDM6Q9NQX0 595 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 METTL5Q9NRN9 209 aaKnown RBP8.96□□□□□ -0.98
VAPB-206ENST00000520497 TMEM59LQ9UK28 342 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 SNX12Q9UMY4 172 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 LZTS1Q9Y250 596 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 PCDHB5Q9Y5E4 795 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 ALG6Q9Y672 507 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 CDY1Q9Y6F8 540 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 BRWD1Q9NSI6 2320 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 MIF4GDA9UHW6 222 aaKnown RBP8.95□□□□□ -0.98
VAPB-206ENST00000520497 F8VP50 259 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 GOLGA8SH3BPF8 625 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 MYO1FO00160 1098 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 PIK3R2O00459 728 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 ENC1O14682 589 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 TNFRSF10BO14763 440 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 PROSCO94903 275 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 ABLIM3O94929 683 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 FBXO21O94952 628 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 ARHGEF15O94989 841 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 URODP06132 367 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 TUBBP07437 444 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 CTSAP10619 480 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 KRT3P12035 628 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 CPB1P15086 417 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 DESP17661 470 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 MAN1A1P33908 653 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 OR1D2P34982 312 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 RFC1P35251 1148 aaPredicted RBP8.95□□□□□ -0.98
VAPB-206ENST00000520497 FLT3P36888 993 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 SLC1A1P43005 524 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 VASPP50552 380 aaPredicted RBP8.95□□□□□ -0.98
VAPB-206ENST00000520497 TKTL1P51854 596 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 RABGGTBP53611 331 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 DAOAP59103 153 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 OGDHQ02218 1023 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 KRT17Q04695 432 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 ADIGQ0VDE8 80 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 MESDQ14696 234 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 PM20D1Q6GTS8 502 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 OR6B2Q6IFH4 312 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 KIAA1841Q6NSI8 718 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 TRNP1Q6NT89 227 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 DCUN1D2Q6PH85 259 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 RNF19BQ6ZMZ0 732 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 BHLHA9Q7RTU4 235 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 CPNE8Q86YQ8 564 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.95□□□□□ -0.98
VAPB-206ENST00000520497 SCUBE3Q8IX30 993 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 TTC9BQ8N6N2 239 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 UBL4BQ8N7F7 174 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 ATAD1Q8NBU5 361 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 CLEC4CQ8WTT0 213 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 HES6Q96HZ4 224 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 PBKQ96KB5 322 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 C8orf48Q96LL4 319 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 CARD6Q9BX69 1037 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 CRISPLD1Q9H336 500 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 LRRC4Q9HBW1 653 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 RXFP1Q9HBX9 757 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 ARGLU1Q9NWB6 273 aaPredicted RBP8.95□□□□□ -0.98
VAPB-206ENST00000520497 ABI2Q9NYB9 513 aaPredicted RBP8.95□□□□□ -0.98
VAPB-206ENST00000520497 FNIP2Q9P278 1114 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 IRAK3Q9Y616 596 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 USP3Q9Y6I4 520 aa8.95□□□□□ -0.98
VAPB-206ENST00000520497 CDH23Q9H251 3354 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 CHD5Q8TDI0 1954 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 SHROOM3Q8TF72 1996 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 FAM92AA1XBS5 289 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 C2CD4BA6NLJ0 364 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 C2CD2LO14523 706 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 DPYSL4O14531 572 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 TRIM66O15016 1216 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 CTIFO43310 598 aaKnown RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 NCK2O43639 380 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 GLI1P08151 1106 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 HAPLN1P10915 354 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms