RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ATAD1Q8NBU5 361 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 BAHD1Q8TBE0 780 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 SPATA18Q8TC71 538 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 PIGOQ8TEQ8 1089 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 HMGB4Q8WW32 186 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 RLN3Q8WXF3 142 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 EZH1Q92800 747 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 BRF1Q92994 677 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 TCEANC2Q96MN5 208 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 ZMAT2Q96NC0 199 aaKnown RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 SEPT5Q99719 369 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 LPIN3Q9BQK8 851 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 ESYT1Q9BSJ8 1104 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 MRPL4Q9BYD3 311 aaKnown RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 SMG9Q9H0W8 520 aaKnown RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 CDT1Q9H211 546 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 CRISPLD1Q9H336 500 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 PLEKHA5Q9HAU0 1116 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 PTPRHQ9HD43 1115 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 TUFT1Q9NNX1 390 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 GPRC5CQ9NQ84 441 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 KCNG1Q9UIX4 513 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 MKL2Q9ULH7 1088 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 SCN1AP35498 2009 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 RELNP78509 3460 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 BSNQ9UPA5 3926 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 MYOFQ9NZM1 2061 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 A0A0A0MRY4 1105 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 TRAV19A0A0A6YYK7 116 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 A0A1B0GTW7 788 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 TCRBV21S2A2A0A5A6 115 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 ARHGEF35A5YM69 484 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 CYSRT1A8MQ03 144 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 SLC9A3R1O14745 358 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 CPLX1O14810 134 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 NDUFS2O75306 463 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 IGHDP01880 384 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 CYP11A1P05108 521 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 EDN1P05305 212 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 CKMP06732 381 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 OR4Q2P0C623 313 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 ATF6P18850 670 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 CYP11B2P19099 503 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 PROZP22891 400 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 U2AF2P26368 475 aaKnown RBP eCLIP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 TNFRSF4P43489 277 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 UCNP55089 124 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 EVCP57679 992 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 ANAPC15P60006 121 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 OSTNP61366 133 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 SNRPNP63162 240 aaKnown RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 RHDQ02161 417 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 GRIK2Q13002 908 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 DMP1Q13316 513 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 NPY5RQ15761 445 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 KYAT1Q16773 422 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 INAVAQ3KP66 663 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 SLC39A12Q504Y0 691 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 NT5DC1Q5TFE4 455 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 TXNDC8Q6A555 127 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 MPZL3Q6UWV2 235 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 DBX2Q6ZNG2 339 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 MAEAQ7L5Y9 396 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 SLCO6A1Q86UG4 719 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 TMPRSS12Q86WS5 348 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 METTL23Q86XA0 190 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 EFCAB13Q8IY85 973 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 DCP1BQ8IZD4 617 aaKnown RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 RGL4Q8IZJ4 473 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 CCDC33Q8N5R6 958 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 ALLCQ8N6M5 410 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 CEP120Q8N960 986 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 TXNDC5Q8NBS9 432 aaKnown RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 ERMNQ8TAM6 284 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 SETD7Q8WTS6 366 aaKnown RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 FOXD4L4Q8WXT5 416 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 BSNDQ8WZ55 320 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 C18orf25Q96B23 403 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 TRMT2BQ96GJ1 504 aaKnown RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 CRELD1Q96HD1 420 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 ZNF419Q96HQ0 510 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 CAMK1GQ96NX5 476 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 PNMA5Q96PV4 448 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 UCN2Q96RP3 112 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 PNKPQ96T60 521 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 HNRNPABQ99729 332 aaKnown RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 ACO2Q99798 780 aaKnown RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 TCHPQ9BT92 498 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 AGXT2Q9BYV1 514 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 C17orf75Q9HAS0 396 aa5.27□□□□□ -1.57
SDCBP-207ENST00000520168 GDF2Q9UK05 429 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 UBQLN1Q9UMX0 589 aaKnown RBP5.27□□□□□ -1.57
SDCBP-207ENST00000520168 B8ZZF3 427 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 SGK1O00141 431 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 TNFSF14O43557 240 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 TOM1L1O75674 476 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 CDKL5O76039 1030 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 WISP1O95388 367 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 KLF8O95600 359 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-207ENST00000520168 FBXO45P0C2W1 286 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms