RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 KIAA1161Q6NSJ0 714 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 LHFPL2Q6ZUX7 228 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 TOM1L2Q6ZVM7 507 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 MAVSQ7Z434 540 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 CNGA4Q8IV77 575 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 NRACQ8N912 160 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 PNLDC1Q8NA58 520 aaKnown RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 SMRP1Q8NCR6 262 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 PRSS3P2Q8NHM4 247 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 C16orf52Q8NHV5 167 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 PNISRQ8TF01 805 aaKnown RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 COQ8BQ96D53 544 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 CNPPD1Q9BV87 410 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 FSD1LQ9BXM9 530 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 BRD9Q9H8M2 597 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 MAN1C1Q9NR34 630 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 PDGFCQ9NRA1 345 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 DUSP22Q9NRW4 184 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 MRPS18AQ9NVS2 196 aaKnown RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 TRNAU1APQ9NX07 287 aaKnown RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 TUBD1Q9UJT1 453 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 TRPC5Q9UL62 973 aaPredicted RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 RAD54BQ9Y620 910 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 USP19O94966 1318 aa2.34□□□□□ -2.04
CCNC-208ENST00000519617 TOPAZ1Q8N9V7 1692 aa2.34□□□□□ -2.04
CCNC-208ENST00000519617 ROBO1Q9Y6N7 1651 aa2.34□□□□□ -2.04
CCNC-208ENST00000519617 PARD3Q8TEW0 1356 aa2.34□□□□□ -2.04
CCNC-208ENST00000519617 KAT6AQ92794 2004 aa2.34□□□□□ -2.04
CCNC-208ENST00000519617 PHLPP1O60346 1717 aa2.34□□□□□ -2.04
CCNC-208ENST00000519617 MON2Q7Z3U7 1717 aa2.34□□□□□ -2.04
CCNC-208ENST00000519617 AKAP12Q02952 1782 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 PXDNQ92626 1479 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 CDK12Q9NYV4 1490 aaPredicted RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 KIF20BQ96Q89 1820 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 MED1Q15648 1581 aaPredicted RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 NHSL1Q5SYE7 1610 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 LY6G6EA0A0G2JKS1 128 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 NT5C1B-RDH14C9J2C7 533 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 H7C1Q1 480 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 EXOC5O00471 708 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 HTATSF1O43719 755 aaKnown RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 NDUFS2O75306 463 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 OAZ2O95190 189 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 GJB1P08034 283 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 IL6RP08887 468 aaPredicted RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 TMEM191BP0C7N4 346 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 CPEP16870 476 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 MALP21145 153 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 HOXC9P31274 260 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 LIPAP38571 399 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 GCLCP48506 637 aaPredicted RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 SLC16A1P53985 500 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 PSMC1P62191 440 aaKnown RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 KLF1Q13351 362 aaPredicted RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 SNAPC2Q13487 334 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 IL10RAQ13651 578 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 GTF2H3Q13889 308 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 TREML2Q5T2D2 321 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 SFRP4Q6FHJ7 346 aaPredicted RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 MIS18BP1Q6P0N0 1132 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 NAPRTQ6XQN6 538 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 TRIM72Q6ZMU5 477 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 PARS2Q7L3T8 475 aaKnown RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 PPP1R32Q7Z5V6 425 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 SPATS2Q86XZ4 545 aaKnown RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 UNC5CLQ8IV45 518 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 AMOTL1Q8IY63 956 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 RP9Q8TA86 221 aaKnown RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 CYP2W1Q8TAV3 490 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 CHAC2Q8WUX2 184 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 RUNDC1Q96C34 613 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 RITA1Q96K30 269 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 TINAGL1Q9GZM7 467 aaPredicted RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 SIK2Q9H0K1 926 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 GNL3LQ9NVN8 582 aaKnown RBP2.33□□□□□ -2.04
CCNC-208ENST00000519617 CFAP97Q9P2B7 532 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 POLKQ9UBT6 870 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 ADAMTS5Q9UNA0 930 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 LIMCH1Q9UPQ0 1083 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 AGAP1Q9UPQ3 857 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 MAP3K19Q56UN5 1328 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 PNPLA6Q8IY17 1366 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 STRCP1A6NGW2 1772 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 OVOS2A0A0J9YW53 1432 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 OVOS2Q6IE36 1432 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 SSH2Q76I76 1423 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 CD163L1Q9NR16 1453 aa2.33□□□□□ -2.04
CCNC-208ENST00000519617 COL22A1Q8NFW1 1626 aaPredicted RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 MYOM1P52179 1685 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 ANKRD26Q9UPS8 1709 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 RGPD8O14715 1765 aaPredicted RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 ZNF785A8K8V0 405 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 POC1B-GALNT4F8VUJ3 575 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 FCHO1O14526 889 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 VPS4BO75351 444 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 TJP3O95049 919 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 RPLP2P05387 115 aaKnown RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 GNAI3P08754 354 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 CHRM5P08912 532 aaPredicted RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 ATP5F1P24539 256 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms