RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SGF29Q96ES7 293 aa7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 SUSD3Q96L08 255 aa7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 SLC46A1Q96NT5 459 aa7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 PNKPQ96T60 521 aa7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 MMS19Q96T76 1030 aa7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 MDFIQ99750 246 aa7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 PDZD7Q9H5P4 517 aa7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 KIF9Q9HAQ2 790 aa7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 TM9SF3Q9HD45 589 aa7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 SEC63Q9UGP8 760 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 ATXN7L1Q9ULK2 861 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 GDAQ9Y2T3 454 aa7.39□□□□□ -1.23
CTNNA1-216ENST00000519489 SMIM28A0A1B0GU29 152 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 WASH3PC4AMC7 463 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 RTN2O75298 545 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 FGF19O95750 216 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 PRKCGP05129 697 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 SFTPCP11686 197 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 RXRAP19793 462 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 TNFRSF4P43489 277 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 ANTXR2P58335 489 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 PTSQ03393 145 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 RHBDF2Q6PJF5 856 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 IGF2-ASQ6U949 168 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 RAB11FIP4Q86YS3 637 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 ADGRG2Q8IZP9 1017 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 LSMEM2Q8N112 164 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 CCDC82Q8N4S0 544 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 CADM4Q8NFZ8 388 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 SH3RF2Q8TEC5 729 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 PIGOQ8TEQ8 1089 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 SLC5A5Q92911 643 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 C18orf25Q96B23 403 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 CAAP1Q9H8G2 361 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 ARHGEF4Q9NR80 690 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 THSD1Q9NS62 852 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 GCNT4Q9P109 453 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 USP36Q9P275 1121 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 TACC2O95359 2948 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 TMEM131Q92545 1883 aa7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 RP1L1Q8IWN7 2480 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-216ENST00000519489 PCSK5Q92824 1860 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 TTC41PQ6P2S7 1318 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 FN1P02751 2386 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 ESPNB1AK53 854 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 EML1O00423 815 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 IFIT3O14879 490 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 MARCH6O60337 910 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 PSMD10O75832 226 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 OAZ2O95190 189 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 FOSP01100 380 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 WNT1P04628 370 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 KRT7P08729 469 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 CKMT2P17540 419 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 GRIA2P42262 883 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 GPR15P49685 360 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 NT5C2P49902 561 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 AFF3P51826 1226 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 MLLT10P55197 1068 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 FAM160A1Q05DH4 1040 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 BNIP3Q12983 259 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 EMC2Q15006 297 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 DHCR24Q15392 516 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 FHL5Q5TD97 284 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 KIAA1324Q6UXG2 1013 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 RSRC2Q7L4I2 434 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 ENGASEQ8NFI3 743 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 IGDCC4Q8TDY8 1250 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 P2RY11Q96G91 374 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 TMEM87BQ96K49 555 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 UROC1Q96N76 676 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 KRT23Q9C075 422 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 UNKQ9C0B0 810 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 MKRN2Q9H000 416 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 C6orf106Q9H6K1 298 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 DONSONQ9NYP3 566 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 DKK3Q9UBP4 350 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 ADAMTS1Q9UHI8 967 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 TCEAL9Q9UHQ7 104 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 SATB2Q9UPW6 733 aa7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 ARID1BQ8NFD5 2236 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-216ENST00000519489 MYO18AQ92614 2054 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 SLC35F4A4IF30 521 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 CASC3O15234 703 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 CSO75390 466 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 APODP05090 189 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 CALM1P0DP23 149 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 CALM2P0DP24 149 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 CALM3P0DP25 149 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 RARGP13631 454 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 GLRA2P23416 452 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 NTSR1P30989 418 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 CIITAP33076 1130 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 GRIA4P48058 902 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 JAK3P52333 1124 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 NR1H3Q13133 447 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 ILKQ13418 452 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 PCBP1Q15365 356 aaKnown RBP eCLIP7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 TMEM259Q4ZIN3 620 aa7.36□□□□□ -1.23
CTNNA1-216ENST00000519489 XKR4Q5GH76 650 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms