RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 LIMS2Q7Z4I7 341 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 OSTM1Q86WC4 334 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 SPATA2LQ8IUW3 424 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 GALNT15Q8N3T1 639 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 FBXO18Q8NFZ0 1043 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 CXorf38Q8TB03 319 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 DNASE2BQ8WZ79 361 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 SLC39A7Q92504 469 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 FOXJ1Q92949 421 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 C8orf76Q96K31 380 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 GABRG3Q99928 467 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 EHD2Q9NZN4 543 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 TRPM5Q9NZQ8 1165 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 TBC1D14Q9P2M4 693 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 GTF3C4Q9UKN8 822 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 HCN2Q9UL51 889 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 PCDHB6Q9Y5E3 794 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 PCDHGB2Q9Y5G2 931 aa8.98□□□□□ -0.97
CTNNA1-215ENST00000519309 ATMQ13315 3056 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 NPHP3-ACAD11A0A0J9YXS1 232 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 A0A1B0GTW7 788 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 E2F8A0AVK6 867 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 ZNF840PA6NDX5 716 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 FLRT2O43155 660 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 SLC26A4O43511 780 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 HUS1O60921 280 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 TULP3O75386 442 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 CER1O95813 267 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 PLA2G4BP0C869 781 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 POLR2BP30876 1174 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 LHX1P48742 406 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 TOB1P50616 345 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 USP46P62068 366 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 GAD2Q05329 585 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 CYP4F3Q08477 520 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 WDR45BQ5MNZ6 344 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 LY6G5CQ5SRR4 150 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 SYCP2LQ5T4T6 812 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 SLFN12LQ6IEE8 588 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 MIB1Q86YT6 1006 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 BRSK2Q8IWQ3 736 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 SCN4BQ8IWT1 228 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 ADGRF2Q8IZF7 708 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 TOP6BLQ8N6T0 577 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 C1orf127Q8N9H9 656 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 ZFRQ96KR1 1074 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 CDC6Q99741 560 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 RNF38Q9H0F5 515 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 ST6GALNAC4Q9H4F1 302 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 PARVGQ9HBI0 331 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 CFAP97Q9P2B7 532 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 AGO2Q9UKV8 859 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 CYP8B1Q9UNU6 501 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 MGAQ8IWI9 3026 aa8.97□□□□□ -0.97
CTNNA1-215ENST00000519309 TISP43B9A030 160 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 ANKRD63C9JTQ0 380 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 TRIM66O15016 1216 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 HCRTO43612 131 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 TRAK2O60296 914 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 CILPO75339 1184 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 ITGB3P05106 788 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 MAPRE1Q15691 268 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 SMAD1Q15797 465 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 C10orf76Q5T2E6 689 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 EGFLAMQ63HQ2 1017 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 ADALQ6DHV7 355 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 IL27RAQ6UWB1 636 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 DTHD1Q6ZMT9 781 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 NUDT18Q6ZVK8 323 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 METTL3Q86U44 580 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 CCDC83Q8IWF9 413 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 RGL4Q8IZJ4 473 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 DEFB119Q8N690 84 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 PDCD7Q8N8D1 485 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 IPO4Q8TEX9 1081 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 KBTBD7Q8WVZ9 684 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 MYLPFQ96A32 169 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 HVCN1Q96D96 273 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 SYT15Q9BQS2 421 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 PRORYQ9H606 182 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 CD93Q9NPY3 652 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 CRTAC1Q9NQ79 661 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 TM7SF3Q9NS93 570 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 SMPD4Q9NXE4 827 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 USP36Q9P275 1121 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 DEC1Q9P2X7 70 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 ITGA11Q9UKX5 1188 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 FNDC3AQ9Y2H6 1198 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 RAI2Q9Y5P3 530 aa8.96□□□□□ -0.98
CTNNA1-215ENST00000519309 TBC1D3BA6NDS4 549 aa8.95□□□□□ -0.98
CTNNA1-215ENST00000519309 TRABD2BA6NFA1 517 aa8.95□□□□□ -0.98
CTNNA1-215ENST00000519309 CYSRT1A8MQ03 144 aa8.95□□□□□ -0.98
CTNNA1-215ENST00000519309 GFRA2O00451 464 aa8.95□□□□□ -0.98
CTNNA1-215ENST00000519309 SCAMP3O14828 347 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-215ENST00000519309 CACNG3O60359 315 aa8.95□□□□□ -0.98
CTNNA1-215ENST00000519309 PPP1R37O75864 691 aa8.95□□□□□ -0.98
CTNNA1-215ENST00000519309 FAM13AO94988 1023 aa8.95□□□□□ -0.98
CTNNA1-215ENST00000519309 ATXN1LP0C7T5 689 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-215ENST00000519309 ANXA13P27216 316 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms