RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 PLCL1Q15111 1095 aa7.85□□□□□ -1.15
CLK4-202ENST00000519132 CRY2Q49AN0 593 aa7.85□□□□□ -1.15
CLK4-202ENST00000519132 RIOX2Q8IUF8 465 aa7.85□□□□□ -1.15
CLK4-202ENST00000519132 C16orf71Q8IYS4 520 aaPredicted RBP7.85□□□□□ -1.15
CLK4-202ENST00000519132 GDF15Q99988 308 aa7.85□□□□□ -1.15
CLK4-202ENST00000519132 CRACR2AQ9BSW2 395 aa7.85□□□□□ -1.15
CLK4-202ENST00000519132 TRIM54Q9BYV2 358 aa7.85□□□□□ -1.15
CLK4-202ENST00000519132 MRPL46Q9H2W6 279 aaKnown RBP7.85□□□□□ -1.15
CLK4-202ENST00000519132 IL1RAPL2Q9NP60 686 aa7.85□□□□□ -1.15
CLK4-202ENST00000519132 KRT84Q9NSB2 600 aa7.85□□□□□ -1.15
CLK4-202ENST00000519132 BARX2Q9UMQ3 279 aaPredicted RBP7.85□□□□□ -1.15
CLK4-202ENST00000519132 COL4A1P02462 1669 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 COL11A2P13942 1736 aaPredicted RBP7.84□□□□□ -1.15
CLK4-202ENST00000519132 KLRK1P26718 216 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 RPS6KA3P51812 740 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 OXCT1P55809 520 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 SH3BGRP55822 239 aaPredicted RBP7.84□□□□□ -1.15
CLK4-202ENST00000519132 PTK2BQ14289 1009 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 PDIA5Q14554 519 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 BTBD16Q32M84 506 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 TTC22Q5TAA0 569 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 SFMBT2Q5VUG0 894 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 CEP128Q6ZU80 1094 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 RNF44Q7L0R7 432 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 SLCO6A1Q86UG4 719 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 ANKRD20A12PQ8NF67 263 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 CPT1CQ8TCG5 803 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 BAG1Q99933 345 aaPredicted RBP7.84□□□□□ -1.15
CLK4-202ENST00000519132 SEMA3GQ9NS98 782 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 SPATA7Q9P0W8 599 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 CLIP2Q9UDT6 1046 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 ZMAT5Q9UDW3 170 aaKnown RBP7.84□□□□□ -1.15
CLK4-202ENST00000519132 ACSL6Q9UKU0 697 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 MROH5Q6ZUA9 1318 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 MTHFD1P11586 935 aaKnown RBP7.84□□□□□ -1.15
CLK4-202ENST00000519132 PRDX5P30044 214 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 IL12RB1P42701 662 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 NAIF1Q69YI7 327 aaPredicted RBP7.84□□□□□ -1.15
CLK4-202ENST00000519132 TMEM130Q8N3G9 435 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 OTUD7AQ8TE49 926 aaPredicted RBP7.84□□□□□ -1.15
CLK4-202ENST00000519132 MSLNLQ96KJ4 702 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 LRRC4CQ9HCJ2 640 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 TMEM160Q9NX00 188 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 NXF1Q9UBU9 619 aaKnown RBP7.84□□□□□ -1.15
CLK4-202ENST00000519132 PCDHB4Q9Y5E5 795 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 FPGT-TNNI3KV9GXZ4 949 aa7.84□□□□□ -1.15
CLK4-202ENST00000519132 PRAMEF4O60810 478 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 MATN4O95460 622 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 LMNAP02545 664 aaKnown RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 SLC3A2P08195 630 aaKnown RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 PECAM1P16284 738 aaPredicted RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 GABRB3P28472 473 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 STAT5AP42229 794 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 ARFIP2P53365 341 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 ROR1Q01973 937 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 TLE1Q04724 770 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 DBPQ10586 325 aaPredicted RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 TFCP2Q12800 502 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 PPP2R5CQ13362 524 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 ERV3-1Q14264 604 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 KCNAB1Q14722 419 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 LRRC24Q50LG9 513 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 RALGPS1Q5JS13 557 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 TMTC4Q5T4D3 741 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 CD276Q5ZPR3 534 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 CCDC129Q6ZRS4 1044 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 FAM20CQ8IXL6 584 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 VGLL2Q8N8G2 317 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 ZFPM2Q8WW38 1151 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 ST8SIA4Q92187 359 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 SLC39A3Q9BRY0 314 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 XPO4Q9C0E2 1151 aaKnown RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 MKNK2Q9HBH9 465 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 ADD3Q9UEY8 706 aaKnown RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 ADGRE2Q9UHX3 823 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 CFAP20Q9Y6A4 193 aaKnown RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 ITIH6Q6UXX5 1313 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 F2RL2O00254 374 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 IGHMBP2P38935 993 aaKnown RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 CDC42EP1Q00587 391 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 MAPK7Q13164 816 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 MAN2A1Q16706 1144 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 OGFOD3Q6PK18 319 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 SASS6Q6UVJ0 657 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 RSPH3Q86UC2 560 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 PUS3Q9BZE2 481 aaKnown RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 EXOC1Q9NV70 894 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 LTBP1Q14766 1721 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 CELA2BP08218 269 aaPredicted RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 FGFR4P22455 802 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 GGT5P36269 586 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 RTP1P59025 263 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 CCBE1Q6UXH8 406 aaPredicted RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 PACS1Q6VY07 963 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 TMEM110Q86TL2 294 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 AACSQ86V21 672 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 PTPN18Q99952 460 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 CHST8Q9H2A9 424 aa7.83□□□□□ -1.16
CLK4-202ENST00000519132 PABPC3Q9H361 631 aaKnown RBP7.83□□□□□ -1.16
CLK4-202ENST00000519132 GHITMQ9H3K2 345 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms