RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 GORABQ5T7V8 394 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 IGFL4Q6B9Z1 124 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 MTHFD1LQ6UB35 978 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 MAVSQ7Z434 540 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 WDR53Q7Z5U6 358 aaPredicted RBP5.3□□□□□ -1.56
SQLE-202ENST00000518604 MBD3L2Q8NHZ7 208 aaPredicted RBP5.3□□□□□ -1.56
SQLE-202ENST00000518604 ABHD5Q8WTS1 349 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 LARP4BQ92615 738 aaKnown RBP5.3□□□□□ -1.56
SQLE-202ENST00000518604 GLG1Q92896 1179 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 RFKQ969G6 155 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 TOR3AQ9H497 397 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 LRIT1Q9P2V4 623 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 VPS51Q9UID3 782 aa5.3□□□□□ -1.56
SQLE-202ENST00000518604 DRG1Q9Y295 367 aaKnown RBP5.3□□□□□ -1.56
SQLE-202ENST00000518604 COL15A1P39059 1388 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 hCG_1642624A0A1W2PR95 340 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 GRID2IPA4D2P6 1211 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 RHOBTB3O94955 611 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 RHOP08100 348 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 CHRM2P08172 466 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 PDHA1P08559 390 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 IL6RP08887 468 aaPredicted RBP5.29□□□□□ -1.56
SQLE-202ENST00000518604 DLDP09622 509 aaKnown RBP5.29□□□□□ -1.56
SQLE-202ENST00000518604 C6P13671 934 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 MST1P26927 711 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 LIPAP38571 399 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 GRIA3P42263 894 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 SP2Q02086 613 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 BLMHQ13867 455 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 PTK2BQ14289 1009 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 ZACNQ401N2 412 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 TREML2Q5T2D2 321 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 RAP1GAP2Q684P5 730 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 SLC9A4Q6AI14 798 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 ZNF551Q7Z340 670 aaPredicted RBP5.29□□□□□ -1.56
SQLE-202ENST00000518604 VRK3Q8IV63 474 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 SLC44A3Q8N4M1 653 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 RP9Q8TA86 221 aaKnown RBP5.29□□□□□ -1.56
SQLE-202ENST00000518604 HELLSQ9NRZ9 838 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 GABRQQ9UN88 632 aa5.29□□□□□ -1.56
SQLE-202ENST00000518604 VWC2LB2RUY7 222 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 ADM5C9JUS6 153 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 URI1O94763 535 aaPredicted RBP5.28□□□□□ -1.56
SQLE-202ENST00000518604 TJP3O95049 919 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 CSTBP04080 98 aaKnown RBP5.28□□□□□ -1.56
SQLE-202ENST00000518604 HGFP14210 728 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 TYRP1P17643 537 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 RBL1P28749 1068 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 ADRA1BP35368 520 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 EIF2B5Q13144 721 aaKnown RBP5.28□□□□□ -1.56
SQLE-202ENST00000518604 ATP1A4Q13733 1029 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 SPARCL1Q14515 664 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 LY6KQ17RY6 165 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 TRIM71Q2Q1W2 868 aaKnown RBP5.28□□□□□ -1.56
SQLE-202ENST00000518604 TBC1D25Q3MII6 688 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 LAIR1Q6GTX8 287 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 ERAP2Q6P179 960 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 USP49Q70CQ1 688 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 CAND1Q86VP6 1230 aaKnown RBP5.28□□□□□ -1.56
SQLE-202ENST00000518604 NEU4Q8WWR8 484 aaPredicted RBP5.28□□□□□ -1.56
SQLE-202ENST00000518604 TFAP2BQ92481 460 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 PDLIM2Q96JY6 352 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 ZBTB45Q96K62 511 aaPredicted RBP5.28□□□□□ -1.56
SQLE-202ENST00000518604 NUDT22Q9BRQ3 303 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 HERPUD2Q9BSE4 406 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 PTPRHQ9HD43 1115 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 ARHGEF3Q9NR81 526 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 SERTAD4Q9NUC0 356 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 DKK3Q9UBP4 350 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 NKX1-2Q9UD57 310 aaPredicted RBP5.28□□□□□ -1.56
SQLE-202ENST00000518604 STEAP1Q9UHE8 339 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 PACSIN3Q9UKS6 424 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 DTNAQ9Y4J8 743 aa5.28□□□□□ -1.56
SQLE-202ENST00000518604 NPC1O15118 1278 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 FOXN1O15353 648 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 NTSR2O95665 410 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 TTLL1O95922 423 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 VIPP01282 170 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 FESP07332 822 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 ARP10275 920 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 NR2F6P10588 404 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 POLE2P56282 527 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 FOXI1Q12951 378 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 GPS1Q13098 491 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 ZNF169Q14929 603 aaPredicted RBP5.27□□□□□ -1.57
SQLE-202ENST00000518604 ZRSR2Q15696 482 aaKnown RBP5.27□□□□□ -1.57
SQLE-202ENST00000518604 ST3GAL2Q16842 350 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 PFKFB4Q16877 469 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 CCDC38Q502W7 563 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 TMTC4Q5T4D3 741 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 HECTD2Q5U5R9 776 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 ABLIM2Q6H8Q1 611 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 ANKRD16Q6P6B7 361 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 TLDC1Q6P9B6 456 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 Q6ZPA2 131 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 PARS2Q7L3T8 475 aaKnown RBP5.27□□□□□ -1.57
SQLE-202ENST00000518604 ZNF627Q7L945 461 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 Q8N1X5 172 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 BEND2Q8NDZ0 799 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 FAM71BQ8TC56 605 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms