RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 PXNP49023 591 aaPredicted RBP11.19□□□□□ -0.62
SPIDR-205ENST00000518060 GALK1P51570 392 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 SEC13P55735 322 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 INCA1Q0VD86 236 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 SRSF5Q13243 272 aaKnown RBP11.19□□□□□ -0.62
SPIDR-205ENST00000518060 SIM2Q14190 667 aaPredicted RBP11.19□□□□□ -0.62
SPIDR-205ENST00000518060 PKN3Q6P5Z2 889 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.19□□□□□ -0.62
SPIDR-205ENST00000518060 LONP2Q86WA8 852 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 SUMF1Q8NBK3 374 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 FBXL13Q8NEE6 735 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 ENGASEQ8NFI3 743 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 RPLP0P6Q8NHW5 317 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 OVCA2Q8WZ82 227 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 CYFIP2Q96F07 1278 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 HEXIM2Q96MH2 286 aaKnown RBP11.19□□□□□ -0.62
SPIDR-205ENST00000518060 EPC1Q9H2F5 836 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 FBXO44Q9H4M3 255 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 CCSER2Q9H7U1 834 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 USP18Q9UMW8 372 aa11.19□□□□□ -0.62
SPIDR-205ENST00000518060 WDR87Q6ZQQ6 2873 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 BIN1O00499 593 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 CYP26A1O43174 497 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 LILRB5O75023 590 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 CILPO75339 1184 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 ADH1CP00326 375 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 CYP17A1P05093 508 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 TCF3P15923 654 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 ACO1P21399 889 aaKnown RBP11.18□□□□□ -0.62
SPIDR-205ENST00000518060 ID4P47928 161 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 PMS1P54277 932 aaKnown RBP11.18□□□□□ -0.62
SPIDR-205ENST00000518060 ZXDBP98169 803 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 FKBP3Q00688 224 aaKnown RBP11.18□□□□□ -0.62
SPIDR-205ENST00000518060 LRRC63Q05C16 580 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 ENPEPQ07075 957 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 CCDC40Q4G0X9 1142 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 FBXO43Q4G163 708 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 ANKRD40Q6AI12 368 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 TTC30AQ86WT1 665 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 CRYBG2Q8N1P7 616 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 ZMIZ2Q8NF64 920 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 NELL1Q92832 810 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 SEMA4DQ92854 862 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 HHIPQ96QV1 700 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 ARID3AQ99856 593 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 GTPBP4Q9BZE4 634 aaKnown RBP11.18□□□□□ -0.62
SPIDR-205ENST00000518060 FBRSL1Q9HCM7 1045 aaKnown RBP11.18□□□□□ -0.62
SPIDR-205ENST00000518060 TLR8Q9NR97 1041 aaKnown RBP11.18□□□□□ -0.62
SPIDR-205ENST00000518060 POLR3BQ9NW08 1133 aaPredicted RBP11.18□□□□□ -0.62
SPIDR-205ENST00000518060 COMMD8Q9NX08 183 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 RAB20Q9NX57 234 aa11.18□□□□□ -0.62
SPIDR-205ENST00000518060 ARMCX3Q9UH62 379 aaPredicted RBP11.18□□□□□ -0.62
SPIDR-205ENST00000518060 OBSL1O75147 1896 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 SPTBN4Q9H254 2564 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 CFAP54Q96N23 3096 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 K7ESF4 209 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 TNFRSF10BO14763 440 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 TLR5O60602 858 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 OLFM2O95897 454 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 CCDC192P0DO97 292 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 HOXC13P31276 330 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 TUBP50607 506 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 KDSRQ06136 332 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 GOLGA8FQ08AF8 430 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 GOLGA8DPQ0D2H9 430 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 LRMPQ12912 555 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 DHCR24Q15392 516 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 CBWD6Q4V339 395 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 CBWD3Q5JTY5 395 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 CBWD5Q5RIA9 395 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 CLEC20AQ6ZU45 233 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 GPRIN1Q7Z2K8 1008 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 ACDQ96AP0 544 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 TIGD1Q96MW7 591 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 HNRNPABQ99729 332 aaKnown RBP11.17□□□□□ -0.62
SPIDR-205ENST00000518060 CISHQ9NSE2 258 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 TBC1D14Q9P2M4 693 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 NAGPAQ9UK23 515 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 MAN1B1Q9UKM7 699 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 CTNND2Q9UQB3 1225 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 OTOGLQ3ZCN5 2332 aa11.17□□□□□ -0.62
SPIDR-205ENST00000518060 ZNF638Q14966 1978 aaKnown RBP11.16□□□□□ -0.62
SPIDR-205ENST00000518060 A0A1W2PQH9 124 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 GADD45BO75293 160 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-205ENST00000518060 PAPSS2O95340 614 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-205ENST00000518060 TBX18O95935 607 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 ADH5P11766 374 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 CD19P15391 556 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 SLC8A3P57103 927 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 ANO4Q32M45 955 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 C2orf27AQ580R0 203 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 LY6G5CQ5SRR4 150 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 PPP1R26Q5T8A7 1209 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-205ENST00000518060 BTBD8Q5XKL5 378 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 LAIR1Q6GTX8 287 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 CCDC26Q8TAB7 109 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 WHAMMQ8TF30 809 aa11.16□□□□□ -0.62
SPIDR-205ENST00000518060 NELFBQ8WX92 580 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms