RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 NACA2Q9H009 215 aa16.2■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TMEM74BQ9NUR3 256 aa16.2■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TBC1D14Q9P2M4 693 aa16.2■□□□□ 0.18
CSGALNACT1-204ENST00000517494 NXF1Q9UBU9 619 aaKnown RBP16.2■□□□□ 0.18
CSGALNACT1-204ENST00000517494 SH3BP1Q9Y3L3 701 aa16.2■□□□□ 0.18
CSGALNACT1-204ENST00000517494 NME7Q9Y5B8 376 aa16.2■□□□□ 0.18
CSGALNACT1-204ENST00000517494 MYO16Q9Y6X6 1858 aa16.2■□□□□ 0.18
CSGALNACT1-204ENST00000517494 KIAA1549LQ6ZVL6 1849 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 HYAL3O43820 417 aaPredicted RBP16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ADAM23O75077 832 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 CST3P01034 146 aaPredicted RBP16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 IRF1P10914 325 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ITPKAP23677 461 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 YWHAQP27348 245 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 EIF2DP41214 584 aaKnown RBP16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 WASP42768 502 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ASIC1P78348 528 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 RPL6Q02878 288 aaKnown RBP16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 GAD2Q05329 585 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TRPC3Q13507 836 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 BYSLQ13895 437 aaKnown RBP16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ANO4Q32M45 955 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 HSF5Q4G112 596 aaPredicted RBP16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 NUP93Q8N1F7 819 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 CGRRF1Q99675 332 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 KIAA1586Q9HCI6 787 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TMEM30AQ9NV96 361 aa16.19■□□□□ 0.18
CSGALNACT1-204ENST00000517494 SPAARA0A1B0GVQ0 90 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 CLIC2O15247 247 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 COCHO43405 550 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 PHACTR2O75167 634 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TACC1O75410 805 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TNFRSF4P43489 277 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 KIR2DL1P43626 348 aaPredicted RBP16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 SIM1P81133 766 aaPredicted RBP16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 MAP7D1Q3KQU3 841 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 C10orf76Q5T2E6 689 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 NELFCDQ8IXH7 590 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 HDDC3Q8N4P3 179 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ZNF513Q8N8E2 541 aaPredicted RBP16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 KDF1Q8NAX2 398 aaPredicted RBP16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 B3GALNT2Q8NCR0 500 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 PDZD8Q8NEN9 1154 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ZCCHC14Q8WYQ9 949 aaKnown RBP16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 USP28Q96RU2 1077 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 B3GNT5Q9BYG0 378 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 CHORDC1Q9UHD1 332 aaPredicted RBP16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 WASF3Q9UPY6 502 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 THADAQ6YHU6 1953 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ATP8B3O60423 1300 aa16.18■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ANAPC1Q9H1A4 1944 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 E2F8A0AVK6 867 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 RTN3O95197 1032 aaPredicted RBP16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 HOXD13P35453 343 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 MYL6P60660 151 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 CYP24A1Q07973 514 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 STK38Q15208 465 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 HECTD3Q5T447 861 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 SCARA5Q6ZMJ2 495 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TRMT11Q7Z4G4 463 aaKnown RBP16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 BBS7Q8IWZ6 715 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 KIAA1958Q8N8K9 716 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 SCAMP5Q8TAC9 235 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 KCNK16Q96T55 309 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 LRRC27Q9C0I9 530 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 CCSER2Q9H7U1 834 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 AGPAT3Q9NRZ7 376 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 DEC1Q9P2X7 70 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 HELZP42694 1942 aaKnown RBP16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 IGF2RP11717 2491 aa16.17■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TMEM8BA6NDV4 472 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 EIF3DO15371 548 aaKnown RBP eCLIP16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ZBTB24O43167 697 aaPredicted RBP16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 AP5Z1O43299 807 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TULP3O75386 442 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 CHRM1P11229 460 aaPredicted RBP16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 HOXB2P14652 356 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 SYT1P21579 422 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 DPP6P42658 865 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 SLC5A3P53794 718 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 GFPT1Q06210 699 aaPredicted RBP16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 BIRC3Q13489 604 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 PSMD6Q15008 389 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 SLC39A14Q15043 492 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 FAM26FQ5R3K3 315 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 NUDT18Q6ZVK8 323 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 FAM35AQ86V20 835 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 GATA6Q92908 595 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 DHX58Q96C10 678 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ZFRQ96KR1 1074 aaKnown RBP16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TMEM121BQ9BXQ6 578 aaPredicted RBP16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 TNMDQ9H2S6 317 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 SMYD3Q9H7B4 428 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 GMIPQ9P107 970 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 CALCOCO1Q9P1Z2 691 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 PILRBQ9UKJ0 227 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 KLK13Q9UKR3 277 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 NUP205Q92621 2012 aa16.16■□□□□ 0.18
CSGALNACT1-204ENST00000517494 ASPMQ8IZT6 3477 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms