RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 BNC2Q6ZN30 1099 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 CCNJLQ8IV13 435 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 PYDC1Q8WXC3 89 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 PTPRN2Q92932 1015 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 CLMNQ96JQ2 1002 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 AGO4Q9HCK5 861 aaKnown RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 BFARQ9NZS9 450 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 SYNPO2Q9UMS6 1093 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 AHDC1Q5TGY3 1603 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 hCG_1818297A0A087WSY0 165 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 TRAFD1O14545 582 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 MAFGO15525 162 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 H2AFYO75367 372 aaKnown RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 PDE5AO76074 875 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 PSMC3P17980 439 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 GNAZP19086 355 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 GPD1P21695 349 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 WASHC5Q12768 1159 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 DCTN2Q13561 401 aaKnown RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 DPYSL3Q14195 570 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 EMC2Q15006 297 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 BOLA3Q53S33 107 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 KCNT1Q5JUK3 1230 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 ARCQ7LC44 396 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 PDZD8Q8NEN9 1154 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 CD101Q93033 1021 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 LENG1Q96BZ8 264 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 SDCCAG3Q96C92 435 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 DGCR14Q96DF8 476 aaKnown RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 SYT15Q9BQS2 421 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 MRPL1Q9BYD6 325 aaKnown RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 SHCBP1LQ9BZQ2 653 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 JPH1Q9HDC5 661 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 BTBD7Q9P203 1132 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 MYO5AQ9Y4I1 1855 aaKnown RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 DYTNA2CJ06 578 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 APOC4-APOC2K7ER74 178 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 BIRC5O15392 142 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 ECE2O60344 883 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 APOC2P02655 101 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 SRGAP2CP0DJJ0 459 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 VAV1P15498 845 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 RPL22P35268 128 aaKnown RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 SPRP35270 261 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 ARL1P40616 181 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 PSMD7P51665 324 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 NOMO3P69849 1222 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 BMPR2Q13873 1038 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 CCDC92Q53HC0 331 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 ALYREFQ86V81 257 aaKnown RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 RTKN2Q8IZC4 609 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 HELQQ8TDG4 1101 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 NKD2Q969F2 451 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 LRRC39Q96DD0 335 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 MASTLQ96GX5 879 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 C7orf26Q96N11 449 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 NMUR2Q9GZQ4 415 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 C2orf40Q9H1Z8 148 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 SNED1Q8TER0 1413 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 ICAM1P05362 532 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 SLC1A6P48664 564 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 SESN2P58004 480 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 SPIRE1Q08AE8 756 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 MPP2Q14168 576 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 PDK2Q15119 407 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 RNASEH2BQ5TBB1 312 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 SEMA4DQ92854 862 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 RNF34Q969K3 372 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 BORCS6Q96GS4 357 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 FAM167AQ96KS9 214 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 S100A14Q9HCY8 104 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 MAP3K20Q9NYL2 800 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 TAS2R1Q9NYW7 299 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 SSX2IPQ9Y2D8 614 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 RNF103-CHMP3A0A140T963 221 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 GRXCR2A6NFK2 248 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 F8VP50 259 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 CHADO15335 359 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 TBX10O75333 385 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 APOEP02649 317 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 RALBP11234 206 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 EEF1B2P24534 225 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 ADARP55265 1226 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 PRKCEQ02156 737 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 IRF5Q13568 498 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 IYDQ6PHW0 289 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 RHBDF2Q6PJF5 856 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 POLNQ7Z5Q5 900 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 SAMD3Q8N6K7 520 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 RBM15BQ8NDT2 890 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 MFSD14AQ96MC6 490 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 DHX35Q9H5Z1 703 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 RNF146Q9NTX7 359 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 CDYLQ9Y232 598 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 NEMP1O14524 444 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 BANF1O75531 89 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 PROCP04070 461 aa6.9□□□□□ -1.3
CPNE3-203ENST00000517490 EEF1DP29692 281 aaKnown RBP6.9□□□□□ -1.3
CPNE3-203ENST00000517490 NCKAP1LP55160 1127 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms