RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 A0A1W2PPI3 338 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 OR6C75A6NL08 312 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 BECN2A8MW95 431 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 FAM72CH0Y354 149 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 TULP2O00295 520 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 SLC16A3O15427 465 aaKnown RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 RGS14O43566 566 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 GLUD1P00367 558 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 ALOX5P09917 674 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 C6orf222P0C671 652 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 IL2RBP14784 551 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 ACADSP16219 412 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 ADSLP30566 484 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 GLUD2P49448 558 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 TLE4Q04727 773 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 PPARAQ07869 468 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 GPS2Q13227 327 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 PABPC1LQ4VXU2 614 aaKnown RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 FAM72AQ5TYM5 149 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 FAM72DQ6L9T8 149 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 RANBP10Q6VN20 620 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 Q6ZR54 194 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 LRRTM1Q86UE6 522 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 FAM72BQ86X60 149 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 SLC41A1Q8IVJ1 513 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 LMNTD2Q8IXW0 634 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 NAGSQ8N159 534 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 CIARTQ8N365 385 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 TMIEQ8NEW7 156 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 CADM4Q8NFZ8 388 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 LILRB1Q8NHL6 650 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZPLD1Q8TCW7 415 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 TMED6Q8WW62 240 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 LPAR1Q92633 364 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 PTPRN2Q92932 1015 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 USP13Q92995 863 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 TRMT61AQ96FX7 289 aaKnown RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZNF300Q96RE9 604 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 BCO1Q9HAY6 547 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 TMPRSS11EQ9UL52 423 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 RUVBL1Q9Y265 456 aaKnown RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 KCNK7Q9Y2U2 307 aa-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 SIRT4Q9Y6E7 314 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 RP1L1Q8IWN7 2480 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-539P-201ENST00000516665 RPTORQ8N122 1335 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 FAM172BPA6NC97 362 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 A6NNC1 897 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 J3KR12 359 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 AGRPO00253 132 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 KIAA0391O15091 583 aaKnown RBP-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 DIAPH1O60610 1272 aaKnown RBP-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 RARBP10826 455 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 TLX1P31314 330 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 RFX5P48382 616 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 RAE1P78406 368 aaKnown RBP-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 HDAC1Q13547 482 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 TMEM177Q53S58 311 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 ASPHD1Q5U4P2 390 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 CTU1Q7Z7A3 348 aaKnown RBP-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 KIAA1958Q8N8K9 716 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 FGFBP3Q8TAT2 258 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 R3HDM4Q96D70 268 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 IL17FQ96PD4 163 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 TRIB1Q96RU8 372 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 FIZ1Q96SL8 496 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 PCIF1Q9H4Z3 704 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 MRS2Q9HD23 443 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 DNAJB11Q9UBS4 358 aa-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 AJAP1Q9UKB5 411 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-539P-201ENST00000516665 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 PCDH17O14917 1159 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 TLR5O60602 858 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 SLC43A1O75387 559 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 HAUS5O94927 633 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 MT-CO3P00414 261 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 KCNA6P17658 529 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 CD6P30203 668 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 DRD3P35462 400 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 MECP2P51608 486 aaKnown RBP-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 POU6F2P78424 691 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 PSG6Q00889 435 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 RUNX1T1Q06455 604 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 TRAF3Q13114 568 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 ENPP2Q13822 863 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 RFTN1Q14699 578 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 LARS2Q15031 903 aaKnown RBP-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 SNAI3Q3KNW1 292 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 TBC1D25Q3MII6 688 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 GDPD4Q6W3E5 623 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 SLC30A10Q6XR72 485 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 FAM57BQ71RH2 274 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 CCDC82Q8N4S0 544 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 BMPERQ8N8U9 685 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 C7orf57Q8NEG2 295 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 LGALS12Q96DT0 336 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 HIC2Q96JB3 615 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 ELF4Q99607 663 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 RBM4BQ9BQ04 359 aaKnown RBP-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 TUBA1CQ9BQE3 449 aa-0.3□□□□□ -2.46
RNU6-539P-201ENST00000516665 CABLES2Q9BTV7 478 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms