RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 UQCRC1P31930 480 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 GKP32189 559 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 SUMO2P61956 95 aaKnown RBP3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 FAM193AP78312 1265 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 KRTAP1-1Q07627 177 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 ARHGEF7Q14155 803 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 GALEQ14376 348 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 GBX1Q14549 363 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 SLC18B1Q6NT16 456 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 SLC2A7Q6PXP3 512 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 CHST15Q7LFX5 561 aaPredicted RBP3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 NEK8Q86SG6 692 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 CNGA4Q8IV77 575 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 TTC8Q8TAM2 541 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 TIFAQ96CG3 184 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 APIPQ96GX9 242 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 SNX18Q96RF0 628 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 APOL5Q9BWW9 433 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 VN1R3Q9BXE9 311 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 INO80BQ9C086 356 aaPredicted RBP3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 NRIP3Q9NQ35 241 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 XPNPEP3Q9NQH7 507 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 OBP2AQ9NY56 170 aa3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 COL3A1P02461 1466 aaPredicted RBP3.9□□□□□ -1.79
SNORA40.12-201ENST00000516329 AGPSO00116 658 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 GCATO75600 419 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 FGAP02671 866 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 RHCEP18577 417 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 YY1P25490 414 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 NTSR1P30989 418 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 CARSP49589 748 aaKnown RBP3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 CPT1AP50416 773 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 PGDP52209 483 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 COPB1P53618 953 aaKnown RBP3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 RHDQ02161 417 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 KLF9Q13886 244 aaPredicted RBP3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 SLC29A2Q14542 456 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 KCNAB1Q14722 419 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 ETFDHQ16134 617 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 CERKLQ49MI3 558 aaPredicted RBP3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 AWAT1Q58HT5 328 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 CATSPERGQ6ZRH7 1159 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 UNC13DQ70J99 1090 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 BCDIN3DQ7Z5W3 292 aaKnown RBP3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 FMNL3Q8IVF7 1028 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 C11orf44Q8N8P7 122 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 TRIM5Q9C035 493 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 SEMA4CQ9C0C4 833 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 CHST8Q9H2A9 424 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 TFCP2L1Q9NZI6 479 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 KLHL13Q9P2N7 655 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 CORO2BQ9UQ03 480 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 ZNF804BA4D1E1 1349 aa3.89□□□□□ -1.79
SNORA40.12-201ENST00000516329 SMIM35A0A1B0GVV1 85 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 KCNU1A8MYU2 1149 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 POC1B-GALNT4F8VUJ3 575 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 F8W8V4 182 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 UBE2Q2LH0YL09 131 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 EXOC5O00471 708 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 SPRY2O43597 315 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 USP1O94782 785 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 TUBB4AP04350 444 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 MYCLP12524 364 aaPredicted RBP3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 CREB1P16220 341 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 TPH1P17752 444 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 DIO1P49895 249 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 TIRAPP58753 221 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 LMAN2Q12907 356 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 HNRNPA0Q13151 305 aaKnown RBP3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 SEMA5AQ13591 1074 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 NPY5RQ15761 445 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 FAM187BQ17R55 369 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 ZNF750Q32MQ0 723 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 PAPD7Q5XG87 772 aaKnown RBP3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 MIS18BP1Q6P0N0 1132 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 MTHFD1LQ6UB35 978 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 PTCHD4Q6ZW05 846 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 YAF2Q8IY57 180 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 GALNT4Q8N4A0 578 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 C8orf58Q8NAV2 365 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 SMCR8Q8TEV9 937 aaPredicted RBP3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 RSPRY1Q96DX4 576 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 WDYHV1Q96HA8 205 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 AS3MTQ9HBK9 375 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 PRDM11Q9NQV5 511 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 TBC1D23Q9NUY8 699 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 ASIC5Q9NY37 505 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 SNX13Q9Y5W8 968 aa3.88□□□□□ -1.79
SNORA40.12-201ENST00000516329 TCRBV5S1A1TA0A578 114 aa3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 ADAMTS3O15072 1205 aa3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 TP73O15350 636 aa3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 PPM1GO15355 546 aaPredicted RBP3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 HRGP04196 525 aa3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 PARP1P09874 1014 aaKnown RBP3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 CYP2A6P11509 494 aaPredicted RBP3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 SFPQP23246 707 aaKnown RBP eCLIP3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 IL1R2P27930 398 aa3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 GATMP50440 423 aa3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 TIAL1Q01085 375 aaKnown RBP eCLIP3.87□□□□□ -1.79
SNORA40.12-201ENST00000516329 ZNF268Q14587 947 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms