RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	hCG_1818297	A0A087WSY0	165 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	LRRD1	A4D1F6	860 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	TULP2	O00295	520 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	ENPP3	O14638	875 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	MAP2K7	O14733	419 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	SYN3	O14994	580 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	TTI1	O43156	1089 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	RRP9	O43818	475 aa	Known RBP	12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	PRPSAP2	O60256	369 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	ZMYND10	O75800	440 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	AP1G2	O75843	785 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	ECEL1	O95672	775 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	FOSL2	P15408	326 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	BRCC3	P46736	316 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	DRG2	P55039	364 aa	Known RBP	12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	YWHAH	Q04917	246 aa	Predicted RBP	12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	CCNG2	Q16589	344 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	BOLA3	Q53S33	107 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	DAB2IP	Q5VWQ8	1189 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	FAM171B	Q6P995	826 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	CD300LG	Q6UXG3	332 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	C4orf50	Q6ZRC1	276 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	CLEC20A	Q6ZU45	233 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	PIGZ	Q86VD9	579 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	JAML	Q86YT9	394 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	MAP7D3	Q8IWC1	876 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	CCDC105	Q8IYK2	499 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	SCML4	Q8N228	414 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	CASKIN2	Q8WXE0	1202 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	PCED1B	Q96HM7	432 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	PAAF1	Q9BRP4	392 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	TMEM175	Q9BSA9	504 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	FUT8	Q9BYC5	575 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	CSNK1G1	Q9HCP0	422 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	CNGB3	Q9NQW8	809 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	OGFR	Q9NZT2	677 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	NR2E1	Q9Y466	385 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	PLXNA3	P51805	1871 aa		12.51	□□□□□ -0.41
LMNA-224	ENST00000515711	ZNF487	B1APH4	448 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	NDC80	O14777	642 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	MDM4	O15151	490 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	ATP2C2	O75185	946 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	TRUB2	O95900	331 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	LCP1	P13796	627 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	MIP	P30301	263 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	FLT3	P36888	993 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	CDKN2B	P42772	138 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	OR1G1	P47890	313 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	MRPS5	P82675	430 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	ADIG	Q0VDE8	80 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	FAAP100	Q0VG06	881 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	ELAVL2	Q12926	359 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	CASP8	Q14790	479 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	GPNMB	Q14956	572 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	PDK2	Q15119	407 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	TAZ	Q16635	292 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	TRIM60	Q495X7	471 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	KIAA0319	Q5VV43	1072 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	CNKSR3	Q6P9H4	555 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	MFSD7	Q6UXD7	560 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	PAQR9	Q6ZVX9	377 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	STRADA	Q7RTN6	431 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	DCP1B	Q8IZD4	617 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	CMAS	Q8NFW8	434 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	CCHCR1	Q8TD31	782 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	IRGQ	Q8WZA9	623 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	MYLPF	Q96A32	169 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	RNF25	Q96BH1	459 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	LPIN3	Q9BQK8	851 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	RTP3	Q9BQQ7	232 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	ERP44	Q9BS26	406 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	COLEC11	Q9BWP8	271 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	OXCT2	Q9BYC2	517 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	DCLK3	Q9C098	648 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	TTYH1	Q9H313	450 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	DMAP1	Q9NPF5	467 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	RRN3	Q9NYV6	651 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	STAP1	Q9ULZ2	295 aa		12.5	□□□□□ -0.41
LMNA-224	ENST00000515711	TET1	Q8NFU7	2136 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	TCRBV7S2A1N4T	A0A589	114 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	MYBPHL	A2RUH7	354 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	CARNS1	A5YM72	827 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	PIK3R2	O00459	728 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	CLDN5	O00501	218 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	DDHD2	O94830	711 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	OAZ2	O95190	189 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	MYBL2	P10244	700 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	TCF4	P15884	667 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	MATK	P42679	507 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	PTGIR	P43119	386 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	CARS	P49589	748 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	ATN1	P54259	1190 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	MAP3K7CL	P57077	242 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	PPP1R7	Q15435	360 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	CCDC14	Q49A88	953 aa		12.49	□□□□□ -0.41
LMNA-224	ENST00000515711	PAN2	Q504Q3	1202 aa	Known RBP	12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms