RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ECHDC2Q86YB7 292 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 ALLCQ8N6M5 410 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 SLC35B2Q8TB61 432 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 PABPC3Q9H361 631 aaKnown RBP16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 NGRNQ9NPE2 291 aaKnown RBP16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 TIMM13Q9Y5L4 95 aaPredicted RBP16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 FKTNO75072 461 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 ITGAVP06756 1048 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 PTPN9P43378 593 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 SLC8A3P57103 927 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 PLCB3Q01970 1234 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 GRIK3Q13003 919 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 SLMAPQ14BN4 828 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 TIGD5Q53EQ6 642 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 PRUNE1Q86TP1 453 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 SYT15Q9BQS2 421 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 C11orf84Q9BUA3 381 aaPredicted RBP16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 CALN1Q9BXU9 219 aa16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 FRMD8P1Q9BZ68 369 aaPredicted RBP16.16■□□□□ 0.18
THUMPD3-210ENST00000515662 BEST1O76090 585 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 DESP17661 470 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 TFE3P19532 575 aaPredicted RBP16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 GRK4P32298 578 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 ITGA8P53708 1063 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 CAV1Q03135 178 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 MBTPS1Q14703 1052 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 BOLA3Q53S33 107 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 RFX6Q8HWS3 928 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 TTC13Q8NBP0 860 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 ACTL9Q8TC94 416 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 ZNF296Q8WUU4 475 aaPredicted RBP16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 TEKT4Q8WW24 435 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 MED10Q9BTT4 135 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 STARD7Q9NQZ5 370 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 SAE1Q9UBE0 346 aaPredicted RBP16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 ANAPC5Q9UJX4 755 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 INPP5FQ9Y2H2 1132 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 RARGP13631 454 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 CDH6P55285 790 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 HDAC4P56524 1084 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 OTUD4Q01804 1114 aaKnown RBP16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 DPYSL3Q14195 570 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 SCYL2Q6P3W7 929 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 CD300LGQ6UXG3 332 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 CLEC20AQ6ZU45 233 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 RTN4RL1Q86UN2 441 aaPredicted RBP16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 GLIS1Q8NBF1 620 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 FAM76AQ8TAV0 307 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 CCHCR1Q8TD31 782 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 KCTD13Q8WZ19 329 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 CENPIQ92674 756 aaPredicted RBP16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 NCAPGQ9BPX3 1015 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 AAASQ9NRG9 546 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 PSD3Q9NYI0 1048 aa16.15■□□□□ 0.18
THUMPD3-210ENST00000515662 B3GAT3O94766 335 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 ADCY1Q08828 1119 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 ADIGQ0VDE8 80 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 MMRN1Q13201 1228 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 TUSC3Q13454 348 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 ARHGEF6Q15052 776 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 BBOF1Q8ND07 529 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 TBCBQ99426 244 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 DDX23Q9BUQ8 820 aaKnown RBP16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 SEMA4AQ9H3S1 761 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 TMBIM4Q9HC24 238 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 CDH9Q9ULB4 789 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 MYBPHLA2RUH7 354 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 I3L4J1 428 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 INPPL1O15357 1258 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 NUDT17P0C025 328 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 MYZAPP0CAP1 466 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 FAM200BP0CF97 657 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 ODC1P11926 461 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 CDR1P51861 262 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 PRMT2P55345 433 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 EFHC1Q5JVL4 640 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 IZUMO3Q5VZ72 239 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 TMEM121Q9BTD3 319 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 ADAM33Q9BZ11 813 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 KRT82Q9NSB4 513 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 PHF24Q9UPV7 400 aa16.14■□□□□ 0.17
THUMPD3-210ENST00000515662 FRMPD3Q5JV73 1810 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 GOLGA6L10A6NI86 522 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 APOC4-APOC2K7ER74 178 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 APOC2P02655 101 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 ZSCAN5DPP0CG00 497 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 CHKAP35790 457 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 KRT81Q14533 505 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 PDK2Q15119 407 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 P3H1Q32P28 736 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 PAN2Q504Q3 1202 aaKnown RBP16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 ZC3H12AQ5D1E8 599 aaKnown RBP16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 DENND2CQ68D51 928 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 KCTD16Q68DU8 428 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 CCDC25Q86WR0 208 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 NDRG1Q92597 394 aaKnown RBP16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 PCED1BQ96HM7 432 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 ATP6V1G3Q96LB4 118 aa16.13■□□□□ 0.17
THUMPD3-210ENST00000515662 UROC1Q96N76 676 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms