RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 TNFRSF10BO14763 440 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 HRO43593 1189 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 OLFM2O95897 454 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 ADH1CP00326 375 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 RETP07949 1114 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 SDHBP21912 280 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 MXI1P50539 228 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 TUBP50607 506 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 INCA1Q0VD86 236 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 STIM1Q13586 685 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 ZCWPW2Q504Y3 356 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 TCERG1LQ5VWI1 586 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 SNX30Q5VWJ9 437 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 ADGRG2Q8IZP9 1017 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 TTC39CQ8N584 583 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 CAMKK1Q8N5S9 505 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 RPLP0P6Q8NHW5 317 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 CYFIP2Q96F07 1278 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 HNRNPABQ99729 332 aaKnown RBP14.46□□□□□ -0.09
TCOF1-215ENST00000515516 SMOQ99835 787 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 APOBEC3GQ9HC16 384 aaKnown RBP14.46□□□□□ -0.09
TCOF1-215ENST00000515516 CSNK1G1Q9HCP0 422 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 C2orf42Q9NWW7 574 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 IL37Q9NZH6 218 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 GMIPQ9P107 970 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 HMGXB4Q9UGU5 601 aa14.46□□□□□ -0.09
TCOF1-215ENST00000515516 RIF1Q5UIP0 2472 aaKnown RBP14.46□□□□□ -0.1
TCOF1-215ENST00000515516 CCDC163A0A0D9SF12 145 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 E2F8A0AVK6 867 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 COCHO43405 550 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 PRCPP42785 496 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 ZXDBP98169 803 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 FKBP3Q00688 224 aaKnown RBP14.45□□□□□ -0.1
TCOF1-215ENST00000515516 LMNB2Q03252 620 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 GOLGA8FQ08AF8 430 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 GOLGA8DPQ0D2H9 430 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 DHCR24Q15392 516 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 DCAF17Q5H9S7 520 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-215ENST00000515516 NAIF1Q69YI7 327 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-215ENST00000515516 PKN3Q6P5Z2 889 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 ERMP1Q7Z2K6 904 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 FBXL13Q8NEE6 735 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 JAKMIP2Q96AA8 810 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 EEF2KMTQ96G04 330 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 FAXDC2Q96IV6 333 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 HEXIM2Q96MH2 286 aaKnown RBP14.45□□□□□ -0.1
TCOF1-215ENST00000515516 TIGD1Q96MW7 591 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 RAB20Q9NX57 234 aa14.45□□□□□ -0.1
TCOF1-215ENST00000515516 FAM92AA1XBS5 289 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 PRR5-ARHGAP8B1AHC4 643 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 SCAMP3O14828 347 aaKnown RBP14.44□□□□□ -0.1
TCOF1-215ENST00000515516 SLC16A3O15427 465 aaKnown RBP14.44□□□□□ -0.1
TCOF1-215ENST00000515516 CILPO75339 1184 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 RPP40O75818 363 aaKnown RBP14.44□□□□□ -0.1
TCOF1-215ENST00000515516 BEST1O76090 585 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 CYP17A1P05093 508 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 CCDC192P0DO97 292 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 PXNP49023 591 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-215ENST00000515516 ARHGAP8P85298 464 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 SRSF5Q13243 272 aaKnown RBP14.44□□□□□ -0.1
TCOF1-215ENST00000515516 PUM1Q14671 1186 aaKnown RBP eCLIP14.44□□□□□ -0.14e-7■■■□□ 18.8
TCOF1-215ENST00000515516 PREPLQ4J6C6 727 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-215ENST00000515516 COBLL1Q53SF7 1204 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 BTBD8Q5XKL5 378 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 SYT13Q7L8C5 426 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 ZMIZ2Q8NF64 920 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 ENGASEQ8NFI3 743 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 RMDN1Q96DB5 314 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 OTUB2Q96DC9 234 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 TWNKQ96RR1 684 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 CCSER2Q9H7U1 834 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 SCML2Q9UQR0 700 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 PCDHA5Q9Y5H7 936 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 FAM186AA6NE01 2351 aa14.44□□□□□ -0.1
TCOF1-215ENST00000515516 PATJQ8NI35 1801 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-215ENST00000515516 PSMA7O14818 248 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 AXIN1O15169 862 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 TLR5O60602 858 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 LRP3O75074 770 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 APBB3O95704 486 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 APODP05090 189 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 ZDHHC11BP0C7U3 371 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 IRF1P10914 325 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 ADH5P11766 374 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 ACO1P21399 889 aaKnown RBP14.43□□□□□ -0.1
TCOF1-215ENST00000515516 ATP5C1P36542 298 aaKnown RBP14.43□□□□□ -0.1
TCOF1-215ENST00000515516 PPP1R2P41236 205 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 SEC13P55735 322 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 SLC8A3P57103 927 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 GAD2Q05329 585 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 LRRC63Q05C16 580 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 SPEM2Q0P670 501 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 DMC1Q14565 340 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 RSPO4Q2I0M5 234 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-215ENST00000515516 ZNF394Q53GI3 561 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 ANKRD40Q6AI12 368 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 CLEC20AQ6ZU45 233 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 NUDT18Q6ZVK8 323 aa14.43□□□□□ -0.1
TCOF1-215ENST00000515516 DGLUCYQ7Z3D6 616 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms