RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 LEMD2Q8NC56 503 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 VN1R2Q8NFZ6 395 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 ADAMTS19Q8TE59 1207 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 IPO4Q8TEX9 1081 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 CPA5Q8WXQ8 436 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 C18orf8Q96DM3 657 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 MCRS1Q96EZ8 462 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 PRKD2Q9BZL6 878 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 SFXN1Q9H9B4 322 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 LUC7LQ9NQ29 371 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 AVENQ9NQS1 362 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 SEPT11Q9NVA2 429 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 ASNSD1Q9NWL6 643 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 TAS2R14Q9NYV8 317 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 ADAM22Q9P0K1 906 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 UXTQ9UBK9 157 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 SCML2Q9UQR0 700 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 DENND4AQ7Z401 1863 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 PRUNE2Q8WUY3 3088 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 TCRBV5S1A1TA0A578 114 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 ANKRD62A6NC57 917 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 E5RJQ4 531 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 XYLBO75191 536 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 IPO7O95373 1038 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 FGF19O95750 216 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 ZBED1O96006 694 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 SPATA31D3P0C874 917 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 GPR15P49685 360 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 TKTL1P51854 596 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 KRT83P78385 493 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 SPA17Q15506 151 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 SNX30Q5VWJ9 437 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 SPATA31D4Q6ZUB0 917 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 GPRIN1Q7Z2K8 1008 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 DNAJB7Q7Z6W7 309 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 XYLT1Q86Y38 959 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 SIX6OS1Q8N1H7 587 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 ELMOD1Q8N336 334 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 TXLNBQ8N3L3 684 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 C3orf20Q8ND61 904 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 LRRC3Q9BY71 257 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 KCNF1Q9H3M0 494 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 LRRC4Q9HBW1 653 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 SPTLC3Q9NUV7 552 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 VCANP13611 3396 aa12.6□□□□□ -0.39
PDLIM5-220ENST00000514830 DOCK6Q96HP0 2047 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 SOBPA7XYQ1 873 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 BTNL10A8MVZ5 291 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 PJA2O43164 708 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 PAPSS1O43252 624 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 SOAT2O75908 522 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 CSPG5O95196 566 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 ERBB2P04626 1255 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 CYP1A2P05177 515 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 H2AFZP0C0S5 128 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 TMEM253P0C7T8 217 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 ZDHHC11BP0C7U3 371 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 YWHAQP27348 245 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 GTF2F1P35269 517 aaKnown RBP eCLIP12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 PSEN1P49768 467 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 RGS7P49802 495 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 DAOAP59103 153 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 ADIGQ0VDE8 80 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 MTF1Q14872 753 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 CCDC85BQ15834 202 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 PLEKHA7Q6IQ23 1121 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 ANKRD54Q6NXT1 300 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 OLFML1Q6UWY5 402 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 MMS22LQ6ZRQ5 1243 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 ZNF662Q6ZS27 426 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 TOGARAM2Q6ZUX3 1019 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 H2AFVQ71UI9 128 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 SLC26A9Q7LBE3 791 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 BHLHA9Q7RTU4 235 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 MON1AQ86VX9 555 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 ARHGAP18Q8N392 663 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 PDZD8Q8NEN9 1154 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 SCAMP5Q8TAC9 235 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 ZNF707Q96C28 371 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 PABPC5Q96DU9 382 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 ZNF512Q96ME7 567 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 TRIM62Q9BVG3 475 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 ST7Q9NRC1 585 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 REXO2Q9Y3B8 237 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 PCDHA13Q9Y5I0 950 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 ADGRG1Q9Y653 693 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 BRWD1Q9NSI6 2320 aa12.59□□□□□ -0.39
PDLIM5-220ENST00000514830 HELZP42694 1942 aaKnown RBP12.58□□□□□ -0.39
PDLIM5-220ENST00000514830 A0A0A6YYK5 440 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 PTPN2P17706 415 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 PFKLP17858 780 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 MAGEA1P43355 309 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 VAV2P52735 878 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 GALCP54803 685 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 USP46P62068 366 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 GPC5P78333 572 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 SLC6A3Q01959 620 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 ITIH3Q06033 890 aa12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 SKIV2LQ15477 1246 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-220ENST00000514830 PABPC1LQ4VXU2 614 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms