RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NELL2Q99435 816 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 SH2D3AQ9BRG2 576 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 RAVER2Q9HCJ3 691 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 OSGEPQ9NPF4 335 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 NDUFA13Q9P0J0 144 aa7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 ZMYND8Q9ULU4 1186 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-219ENST00000514743 STMND1H3BQB6 276 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 RAD51CO43502 376 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 HEXIM1O94992 359 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 CCNE2O96020 404 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 COPAP53621 1224 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 GALCP54803 685 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 RPS6P62753 249 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 MYL7Q01449 175 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 MOGQ16653 247 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 HS2ST1Q7LGA3 356 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 NT5DC3Q86UY8 548 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 GLYCTKQ8IVS8 523 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 C12orf56Q8IXR9 622 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 FBXO41Q8TF61 875 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 CASKIN2Q8WXE0 1202 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 LPAR1Q92633 364 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 HES6Q96HZ4 224 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 KRT12Q99456 494 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 PLEKHA5Q9HAU0 1116 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 EPB41L5Q9HCM4 733 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 WASH6PQ9NQA3 447 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 EMC3Q9P0I2 261 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 SLC12A4Q9UP95 1085 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 SLC8A2Q9UPR5 921 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 E7ENQ6 273 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 KCNK3O14649 394 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 TJP3O95049 919 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 PTPN2P17706 415 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 NPEPPSP55786 919 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 ZNF280AP59817 542 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 GTF2BQ00403 316 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 PPATQ06203 517 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 PPP3CAQ08209 521 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 MTMR1Q13613 665 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 PLS1Q14651 629 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 KLHL38Q2WGJ6 581 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 EPC2Q52LR7 807 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 POTEAQ6S8J7 498 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 PPP1R21Q6ZMI0 780 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 RASGEF1CQ8N431 466 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 METTL13Q8N6R0 699 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 U2AF1L4Q8WU68 220 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 RSAD2Q8WXG1 361 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 DACT3Q96B18 629 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 NLRP4Q96MN2 994 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 TTC25Q96NG3 672 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 LPIN3Q9BQK8 851 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 CBWD1Q9BRT8 395 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 ST6GALNAC4Q9H4F1 302 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 EHD1Q9H4M9 534 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 PIH1D1Q9NWS0 290 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 TAS2R14Q9NYV8 317 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 BCS1LQ9Y276 419 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 SNX5Q9Y5X3 404 aa7.78□□□□□ -1.16
PDLIM5-219ENST00000514743 OTOFQ9HC10 1997 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 KRBA1A5PL33 1030 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 SYCE1LA8MT33 242 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 BACH1O14867 736 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 ARHGEF15O94989 841 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 PRLP01236 227 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 H2AFZP0C0S5 128 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 PLS3P13797 630 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 PSMA3P25788 255 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 QARSP47897 775 aaKnown RBP7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 PTDSS1P48651 473 aaKnown RBP7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 CLK3P49761 638 aaKnown RBP7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 NCKAP1LP55160 1127 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 FAPQ12884 760 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 RPS6KA1Q15418 735 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 BRDTQ58F21 947 aaPredicted RBP7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 DCAF12L1Q5VU92 463 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 STXBP4Q6ZWJ1 553 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 H2AFVQ71UI9 128 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 ARHGEF19Q8IW93 802 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 CPXCR1Q8N123 301 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 PSD4Q8NDX1 1056 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 ARHGEF26Q96DR7 871 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 ADNPQ9H2P0 1102 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 PCIF1Q9H4Z3 704 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 GPRC5CQ9NQ84 441 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 HOMER2Q9NSB8 354 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 UCKL1Q9NWZ5 548 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 TMEM5Q9Y2B1 443 aa7.77□□□□□ -1.16
PDLIM5-219ENST00000514743 EMSYQ7Z589 1322 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 HGSO14964 777 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 EXOC3O60645 756 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 TMEM253P0C7T8 217 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 EIF2AK2P19525 551 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 YWHABP31946 246 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 GSSP48637 474 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 IST1P53990 364 aa7.77□□□□□ -1.17
PDLIM5-219ENST00000514743 MAPRE1Q15691 268 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms