RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ALG8Q9BVK2 526 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 PPCSQ9HAB8 311 aa6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 DRG1Q9Y295 367 aaKnown RBP6.08□□□□□ -1.44
HMGCS1-207ENST00000514610 EIF3JO75822 258 aaKnown RBP6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 ESRRBO95718 433 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 ELFN1P0C7U0 828 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 C6P13671 934 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 EPHA3P29320 983 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 MCM7P33993 719 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 HTR7P34969 479 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 GATMP50440 423 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 ICA1Q05084 483 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 ABHD18Q0P651 414 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 MPP3Q13368 585 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 ELF2Q15723 593 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 PFKFB4Q16877 469 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 ZNF618Q5T7W0 954 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 MZT2AQ6P582 158 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 DPY19L3Q6ZPD9 716 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 PEG10Q86TG7 708 aaKnown RBP6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 CAND1Q86VP6 1230 aaKnown RBP6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 ULK2Q8IYT8 1036 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 METTL25Q8N6Q8 603 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 STYXQ8WUJ0 223 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 NEU4Q8WWR8 484 aaPredicted RBP6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 ZDHHC12Q96GR4 267 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 ZNF668Q96K58 619 aaPredicted RBP6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 HAPLN3Q96S86 360 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 VN1R3Q9BXE9 311 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 CYP4F11Q9HBI6 524 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 EHD3Q9NZN3 535 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 HS3ST3A1Q9Y663 406 aa6.07□□□□□ -1.44
HMGCS1-207ENST00000514610 PLEKHD1A6NEE1 506 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 COQ9O75208 318 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 CSTBP04080 98 aaKnown RBP6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 NR2F6P10588 404 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 IDEP14735 1019 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 JUPP14923 745 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 ZFXP17010 805 aaPredicted RBP6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 SLC5A2P31639 672 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 CHKAP35790 457 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 PLA2G5P39877 138 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 GPS1Q13098 491 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 GRM1Q13255 1194 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 SPARCL1Q14515 664 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 DHX8Q14562 1220 aaKnown RBP6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 CYP1B1Q16678 543 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 NBPF8Q3BBV2 869 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 ZACNQ401N2 412 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 TEDDM1Q5T9Z0 273 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 HECTD2Q5U5R9 776 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 KRT73Q86Y46 540 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 C11orf44Q8N8P7 122 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 MBD3L2Q8NHZ7 208 aaPredicted RBP6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 CAVIN3Q969G5 261 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 INO80BQ9C086 356 aaPredicted RBP6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 TMEM8AQ9HCN3 771 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 FOXJ2Q9P0K8 574 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 SCAF8Q9UPN6 1271 aaKnown RBP6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 SLC27A6Q9Y2P4 619 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 DTNAQ9Y4J8 743 aa6.06□□□□□ -1.44
HMGCS1-207ENST00000514610 OR2W5A6NFC9 320 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 PCDH17O14917 1159 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 PIP5K1CO60331 668 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 SKAP2O75563 359 aaPredicted RBP6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 TNFRSF6BO95407 300 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 RBL1P28749 1068 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 MRPS35P82673 323 aaKnown RBP6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 TAP1Q03518 808 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 FSTL1Q12841 308 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 ATP1A4Q13733 1029 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 BLMHQ13867 455 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 BMPR2Q13873 1038 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 CCDC38Q502W7 563 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 ARL6IP4Q66PJ3 421 aaKnown RBP6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 KAZNQ674X7 775 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 CLEC9AQ6UXN8 241 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 CACNA2D3Q8IZS8 1091 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 ATG16L2Q8NAA4 619 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 SUPT20HQ8NEM7 779 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 ACTRT2Q8TDY3 377 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 XAGE5Q8WWM1 108 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 WDYHV1Q96HA8 205 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 RMDN3Q96TC7 470 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 GRHPRQ9UBQ7 328 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 USP22Q9UPT9 525 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 COL15A1P39059 1388 aa6.05□□□□□ -1.44
HMGCS1-207ENST00000514610 LOC102724159A0A0B4J2E5 919 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 LINC00473A8K010 186 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 SYT5O00445 386 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 ACKR2O00590 384 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 TRIM38O00635 465 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 MGST3O14880 152 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 DHHO43323 396 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 ASNA1O43681 348 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 CBFA2T3O75081 653 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 YY1P25490 414 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 ITPKBP27987 946 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 CTGFP29279 349 aa6.04□□□□□ -1.44
HMGCS1-207ENST00000514610 AVPR1BP47901 424 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms