RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 PSEN1P49768 467 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 ZNF165P49910 485 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 TUBP50607 506 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 COPB1P53618 953 aaKnown RBP13.08□□□□□ -0.32
COPB2-212ENST00000514508 PLCB2Q00722 1185 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 APBA1Q02410 837 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 PRKCQQ04759 706 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 PDE4CQ08493 712 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 HECTD3Q5T447 861 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 GPRIN1Q7Z2K8 1008 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 SUGP1Q8IWZ8 645 aaKnown RBP13.08□□□□□ -0.32
COPB2-212ENST00000514508 SIX5Q8N196 739 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 FBXL6Q8N531 539 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 TFAP2BQ92481 460 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 SHC3Q92529 594 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 SHDQ96IW2 340 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 LRRC3BQ96PB8 259 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 SLC22A12Q96S37 553 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 HSD3B7Q9H2F3 369 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 TLR8Q9NR97 1041 aaKnown RBP13.08□□□□□ -0.32
COPB2-212ENST00000514508 GMIPQ9P107 970 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 DNAJC12Q9UKB3 198 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 CA14Q9ULX7 337 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 ARHGAP26Q9UNA1 814 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.08□□□□□ -0.32
COPB2-212ENST00000514508 CCL26Q9Y258 94 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 USP3Q9Y6I4 520 aa13.08□□□□□ -0.32
COPB2-212ENST00000514508 KRBA1A5PL33 1030 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 MED7O43513 233 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 CAVIN2O95810 425 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 PDGFBP01127 241 aaPredicted RBP13.07□□□□□ -0.32
COPB2-212ENST00000514508 BRD2P25440 801 aaKnown RBP13.07□□□□□ -0.32
COPB2-212ENST00000514508 PLA2G4AP47712 749 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 SLC7A9P82251 487 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 MLF2Q15773 248 aaPredicted RBP13.07□□□□□ -0.32
COPB2-212ENST00000514508 PKDCCQ504Y2 493 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 SLC44A4Q53GD3 710 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 RAB41Q5JT25 222 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 KLHDC7AQ5VTJ3 777 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 DPY19L2P1Q6NXN4 242 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 CCDC186Q7Z3E2 898 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 DHX40Q8IX18 779 aaKnown RBP13.07□□□□□ -0.32
COPB2-212ENST00000514508 UBA3Q8TBC4 463 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 ZSWIM1Q9BR11 485 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 COL4A2P08572 1712 aa13.07□□□□□ -0.32
COPB2-212ENST00000514508 BECN2A8MW95 431 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 M0QYV0 167 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 ARNTLO00327 626 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 CYP26A1O43174 497 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 MBL2P11226 248 aaPredicted RBP13.06□□□□□ -0.32
COPB2-212ENST00000514508 GNA15P30679 374 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 USP8P40818 1118 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 CLCN5P51795 746 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 TKTL1P51854 596 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 MLLT6P55198 1093 aaPredicted RBP13.06□□□□□ -0.32
COPB2-212ENST00000514508 STARD6P59095 220 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 MTF1Q14872 753 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 ZNF77Q15935 545 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 MEA1Q16626 185 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 ZSCAN23Q3MJ62 389 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
COPB2-212ENST00000514508 ZNF276Q8N554 614 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 KIAA1958Q8N8K9 716 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 CSGALNACT1Q8TDX6 532 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 SLC35F5Q8WV83 523 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 ZNF606Q8WXB4 792 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 KCTD13Q8WZ19 329 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 LSM14BQ9BX40 385 aaKnown RBP13.06□□□□□ -0.32
COPB2-212ENST00000514508 RNF38Q9H0F5 515 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 LRRC4Q9HBW1 653 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 PLCB1Q9NQ66 1216 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 CLIC5Q9NZA1 410 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 DAAM1Q9Y4D1 1078 aa13.06□□□□□ -0.32
COPB2-212ENST00000514508 TRIOO75962 3097 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 LGALS16A8MUM7 142 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 TULP2O00295 520 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 FOXN3O00409 490 aaPredicted RBP13.05□□□□□ -0.32
COPB2-212ENST00000514508 COCHO43405 550 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 THAP12O43422 761 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 TLR5O60602 858 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 CALCAP01258 141 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 GLULP15104 373 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 UCHL3P15374 230 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 UBXN1Q04323 297 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 PTK2Q05397 1052 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 USP4Q13107 963 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 IQCB1Q15051 598 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 PM20D1Q6GTS8 502 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 APTXQ7Z2E3 356 aaKnown RBP13.05□□□□□ -0.32
COPB2-212ENST00000514508 TADA2BQ86TJ2 420 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 DDX42Q86XP3 938 aaKnown RBP eCLIP13.05□□□□□ -0.32
COPB2-212ENST00000514508 ARHGAP18Q8N392 663 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 FLCNQ8NFG4 579 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 SH3RF2Q8TEC5 729 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 SECISBP2LQ93073 1101 aaKnown RBP13.05□□□□□ -0.32
COPB2-212ENST00000514508 MSANTD3Q96H12 275 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 ZFYVE19Q96K21 471 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 HSFY1Q96LI6 401 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 FAM83CQ9BQN1 747 aa13.05□□□□□ -0.32
COPB2-212ENST00000514508 NAA15Q9BXJ9 866 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms