RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	UNC45A	Q9H3U1	944 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	HEYL	Q9NQ87	328 aa	Predicted RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GJB4	Q9NTQ9	266 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MAP3K20	Q9NYL2	800 aa	Known RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	RRN3	Q9NYV6	651 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	XPR1	Q9UBH6	696 aa		3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FBXO9	Q9UK97	447 aa	Predicted RBP	3.99	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GCOM1	H8Y6P7	765 aa	Predicted RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MPPED1	O15442	326 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PROM1	O43490	865 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	RASSF9	O75901	435 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GLP2R	O95838	553 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	AGR2	O95994	175 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	EGR1	P18146	543 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	BDNF	P23560	247 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PHKA1	P46020	1223 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	NXPH1	P58417	271 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PSMC1	P62191	440 aa	Known RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	NHLH1	Q02575	133 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ITIH3	Q06033	890 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SIM2	Q14190	667 aa	Predicted RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLC29A2	Q14542	456 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	TAF12	Q16514	161 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	INSC	Q1MX18	579 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	TRIM71	Q2Q1W2	868 aa	Known RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLC4A8	Q2Y0W8	1093 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PREPL	Q4J6C6	727 aa	Predicted RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FBXO47	Q5MNV8	452 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	TEDDM1	Q5T9Z0	273 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	UTP14C	Q5TAP6	766 aa	Known RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MICALCL	Q6ZW33	695 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GATAD2A	Q86YP4	633 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	NME8	Q8N427	588 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GLIS1	Q8NBF1	620 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PCSK9	Q8NBP7	692 aa	Known RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	GPR150	Q8NGU9	434 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	STT3B	Q8TCJ2	826 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	RSC1A1	Q92681	617 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	VOPP1	Q96AW1	172 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	LRRC46	Q96FV0	321 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MARS2	Q96GW9	593 aa	Known RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PDLIM2	Q96JY6	352 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PPP1R9B	Q96SB3	815 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SMO	Q99835	787 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SORBS1	Q9BX66	1292 aa	Known RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	3.98	□□□□□ -1.77	2e-11	■□□□□ 10.8
CALCOCO2-223	ENST00000514267	MS4A7	Q9GZW8	240 aa	Predicted RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SYNPO2L	Q9H987	977 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	UNKL	Q9H9P5	680 aa	Known RBP	3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SAYSD1	Q9NPB0	183 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ITM2C	Q9NQX7	267 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ZSCAN32	Q9NX65	697 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MID2	Q9UJV3	735 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLC13A4	Q9UKG4	626 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	HDAC9	Q9UKV0	1011 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	TMEM98	Q9Y2Y6	226 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SCIN	Q9Y6U3	715 aa		3.98	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SPATA31A6	Q5VVP1	1343 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SPATA31A3	Q5VYP0	1347 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	AQP7P3	A6NL99	342 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267		J3KRW8	73 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	EIF3F	O00303	357 aa	Predicted RBP	3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	IPO5	O00410	1097 aa	Known RBP	3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	NDST3	O95803	873 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	HSP90AA1	P07900	732 aa	Known RBP	3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ITGA2B	P08514	1039 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CDK4	P11802	303 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FCER1A	P12319	257 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLC6A2	P23975	617 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLC5A2	P31639	672 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	RARRES1	P49788	294 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	CPT1A	P50416	773 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SATB1	Q01826	763 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FPGS	Q05932	587 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SLFN5	Q08AF3	891 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FOXI1	Q12951	378 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ARHGEF7	Q14155	803 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PTPRR	Q15256	657 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	NPY5R	Q15761	445 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ADCK5	Q3MIX3	580 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	NOMO2	Q5JPE7	1267 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	HYI	Q5T013	277 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	KIAA1614	Q5VZ46	1190 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MRNIP	Q6NTE8	343 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	JMJD6	Q6NYC1	403 aa	Predicted RBP	3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	KIAA0408	Q6ZU52	694 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	PTF1A	Q7RTS3	328 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	OTUD7A	Q8TE49	926 aa	Predicted RBP	3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SSH3	Q8TE77	659 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	IPO4	Q8TEX9	1081 aa	Known RBP	3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	SNX19	Q92543	992 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	BBC3	Q96PG8	261 aa	Predicted RBP	3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	MESP1	Q9BRJ9	268 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	FAM167B	Q9BTA0	163 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ALG8	Q9BVK2	526 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ZBTB26	Q9HCK0	441 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	ADARB2	Q9NS39	739 aa	Known RBP	3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	TBC1D23	Q9NUY8	699 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	IGSF9	Q9P2J2	1179 aa		3.97	□□□□□ -1.77
CALCOCO2-223	ENST00000514267	HESX1	Q9UBX0	185 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms