RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 CCNIQ14094 377 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 SMAD1Q15797 465 aaKnown RBP5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 DCAF17Q5H9S7 520 aaPredicted RBP5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 AGAP9Q5VTM2 703 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 SPATA1Q5VX52 437 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 ATG16L1Q676U5 607 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 SFRP4Q6FHJ7 346 aaPredicted RBP5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 ITPRIPL1Q6GPH6 555 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 ZNF280DQ6N043 979 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 FOXR2Q6PJQ5 311 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 SYT13Q7L8C5 426 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 TAX1BP1Q86VP1 789 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 Q8N3U1 123 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 TP53I13Q8NBR0 393 aaPredicted RBP5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 ZNF483Q8TF39 744 aaPredicted RBP5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 HMGB4Q8WW32 186 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 ZUFSPQ96AP4 578 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 ERP27Q96DN0 273 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 OR14A2Q96R54 314 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 CHCHD6Q9BRQ6 235 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 AGXT2Q9BYV1 514 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 PLA2G3Q9NZ20 509 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 KCND3Q9UK17 655 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 SMG5Q9UPR3 1016 aaKnown RBP5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 SH3BP1Q9Y3L3 701 aa5.65□□□□□ -1.5
CALCOCO2-222ENST00000514006 AATKQ6ZMQ8 1374 aa5.65□□□□□ -1.51
CALCOCO2-222ENST00000514006 LMTK3Q96Q04 1460 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 A0A087X0M5 115 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 A0A1B0GX30 115 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 BTBD11A6QL63 1104 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 TSPAN3O60637 253 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 ERN1O75460 977 aaKnown RBP5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 RTN3O95197 1032 aaPredicted RBP5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 TFRCP02786 760 aaKnown RBP5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 HLA-DOAP06340 250 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 RBL1P28749 1068 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 NTSR1P30989 418 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 UQCRC1P31930 480 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 NDUFV1P49821 464 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 GATMP50440 423 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 CDK7P50613 346 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 ANXA11P50995 505 aaKnown RBP5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 SLURP1P55000 103 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 DCAF7P61962 342 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 MC2RQ01718 297 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 NHLH2Q02577 135 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 VMACQ2NL98 169 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 GALNTL6Q49A17 601 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 PREPLQ4J6C6 727 aaPredicted RBP5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 CTXN3Q4LDR2 81 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 SLC45A4Q5BKX6 768 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 FAM102AQ5T9C2 384 aaPredicted RBP5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 METRNLQ641Q3 311 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 ACAD10Q6JQN1 1059 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 NEK10Q6ZWH5 1172 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 FASTKD5Q7L8L6 764 aaKnown RBP5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 CLNKQ7Z7G1 428 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 NBPF11Q86T75 865 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 LGI4Q8N135 537 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 USP38Q8NB14 1042 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 OR56A1Q8NGH5 318 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 UBE2Q2Q8WVN8 375 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 ZBTB45Q96K62 511 aaPredicted RBP5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 C7orf26Q96N11 449 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 NEU1Q99519 415 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 REEP2Q9BRK0 252 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 ABHD16BQ9H3Z7 469 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 TBX20Q9UMR3 447 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 JAG2Q9Y219 1238 aa5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.64□□□□□ -1.51
CALCOCO2-222ENST00000514006 A0A1B0GTW7 788 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 A0A1W2PPH5 198 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 KIF28PB7ZC32 967 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 LEFTY2O00292 366 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 GFPT2O94808 682 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 LARGE1O95461 756 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 CER1O95813 267 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 GPANK1O95872 356 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 CSF1RP07333 972 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 FGFR4P22455 802 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 EPHA3P29320 983 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 CD6P30203 668 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 MSX2P35548 267 aaPredicted RBP5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 MTHFSP49914 203 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 PDE6CP51160 858 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 CLNS1AP54105 237 aaKnown RBP5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 ADAM17P78536 824 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 HSD11B2P80365 405 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 NUCB1Q02818 461 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 SF3A3Q12874 501 aaKnown RBP eCLIP5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 P3H1Q32P28 736 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 SLC9C2Q5TAH2 1124 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 SPOCD1Q6ZMY3 1216 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 TMPRSS9Q7Z410 1059 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 TRABD2AQ86V40 505 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 TMEM151BQ8IW70 566 aa5.63□□□□□ -1.51
CALCOCO2-222ENST00000514006 D2HGDHQ8N465 521 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms