RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 CASTOR2A6NHX0 329 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 H7C4K7 107 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 PDE2AO00408 941 aaPredicted RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 NRP1O14786 923 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 DGKIO75912 1065 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 BAIAP3O94812 1187 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 FAM200BP0CF97 657 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 PDGFRAP16234 1089 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 ALDH7A1P49419 539 aaKnown RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 DRG2P55039 364 aaKnown RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 TSPY1Q01534 308 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 LONRF2Q1L5Z9 754 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 GOLGA7BQ2TAP0 167 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 INTS6LQ5JSJ4 861 aaKnown RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 RAB41Q5JT25 222 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 SEL1L2Q5TEA6 688 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 OR6B2Q6IFH4 312 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 PAQR9Q6ZVX9 377 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 SLC26A9Q7LBE3 791 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 OSTM1Q86WC4 334 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 ZNF280BQ86YH2 543 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 PSTKQ8IV42 348 aaKnown RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 C3orf58Q8NDZ4 430 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 CMASQ8NFW8 434 aaPredicted RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 SLC2A14Q8TDB8 520 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 C2orf15Q8WU43 125 aaKnown RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 IRGQQ8WZA9 623 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 SMARCD1Q96GM5 515 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 FUBP3Q96I24 572 aaKnown RBP eCLIP10.37□□□□□ -0.75
TPM3-221ENST00000513769 RBM41Q96IZ5 413 aaKnown RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 CAPZA3Q96KX2 299 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 RNPC3Q96LT9 517 aaKnown RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 SYT15Q9BQS2 421 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 PARD6BQ9BYG5 372 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 FRMD8P1Q9BZ68 369 aaPredicted RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 SLITRK6Q9H5Y7 841 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 NRDE2Q9H7Z3 1164 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 CNGB3Q9NQW8 809 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 ST7Q9NRC1 585 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.37□□□□□ -0.75
TPM3-221ENST00000513769 COMMD8Q9NX08 183 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 PACSIN2Q9UNF0 486 aaPredicted RBP10.37□□□□□ -0.75
TPM3-221ENST00000513769 INPP5FQ9Y2H2 1132 aa10.37□□□□□ -0.75
TPM3-221ENST00000513769 CCDC151A5D8V7 595 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 OR6C75A6NL08 312 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 C2CD4BA6NLJ0 364 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 ZNF487B1APH4 448 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 KRIT1O00522 736 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 ERLIN1O75477 346 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 ENDOD1O94919 500 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 FGGP02679 453 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 AMHP03971 560 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 GALTP07902 379 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 PYGMP11217 842 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 GPD1P21695 349 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 CHRNA3P32297 505 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 CYP2C18P33260 490 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 PTPN7P35236 360 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 PTPN9P43378 593 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 OR1G1P47890 313 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 CCL23P55773 120 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 YWHAZP63104 245 aaKnown RBP10.36□□□□□ -0.75
TPM3-221ENST00000513769 MRPS5P82675 430 aaKnown RBP10.36□□□□□ -0.75
TPM3-221ENST00000513769 CYP1B1Q16678 543 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 ODF2Q5BJF6 829 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 PM20D1Q6GTS8 502 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 VSTM1Q6UX27 236 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 TREML4Q6UXN2 200 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 MAP7D3Q8IWC1 876 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 CENPIQ92674 756 aaPredicted RBP10.36□□□□□ -0.75
TPM3-221ENST00000513769 ALG3Q92685 438 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 PCED1BQ96HM7 432 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 MS4A14Q96JA4 679 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 PKNOX2Q96KN3 472 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 MCEEQ96PE7 176 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 TBCBQ99426 244 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 PAAF1Q9BRP4 392 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 DDX23Q9BUQ8 820 aaKnown RBP10.36□□□□□ -0.75
TPM3-221ENST00000513769 B3GNT5Q9BYG0 378 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 DPEP3Q9H4B8 488 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 LRRC19Q9H756 370 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 LRRC4Q9HBW1 653 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 CRTAC1Q9NQ79 661 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 MAP10Q9P2G4 905 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 HSFX1Q9UBD0 423 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 ADAM28Q9UKQ2 775 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 MAFFQ9ULX9 164 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 ATP11BQ9Y2G3 1177 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 TTC3P53804 2025 aa10.36□□□□□ -0.75
TPM3-221ENST00000513769 TDRD15B5MCY1 1934 aaKnown RBP10.35□□□□□ -0.75
TPM3-221ENST00000513769 MYBPHLA2RUH7 354 aa10.35□□□□□ -0.75
TPM3-221ENST00000513769 E5RJQ4 531 aa10.35□□□□□ -0.75
TPM3-221ENST00000513769 PAPSS1O43252 624 aaPredicted RBP10.35□□□□□ -0.75
TPM3-221ENST00000513769 HSF2BPO75031 334 aa10.35□□□□□ -0.75
TPM3-221ENST00000513769 ATP2C2O75185 946 aa10.35□□□□□ -0.75
TPM3-221ENST00000513769 TJP3O95049 919 aa10.35□□□□□ -0.75
TPM3-221ENST00000513769 F9P00740 461 aa10.35□□□□□ -0.75
TPM3-221ENST00000513769 SNRPBP14678 240 aaKnown RBP10.35□□□□□ -0.75
TPM3-221ENST00000513769 RAG1P15918 1043 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms