RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 KIFC3Q9BVG8 833 aa6.34□□□□□ -1.39
GYPB-215ENST00000513677 FAM126AQ9BYI3 521 aaPredicted RBP6.34□□□□□ -1.39
GYPB-215ENST00000513677 AGXT2Q9BYV1 514 aa6.34□□□□□ -1.39
GYPB-215ENST00000513677 TTC12Q9H892 705 aaPredicted RBP6.34□□□□□ -1.39
GYPB-215ENST00000513677 ANKEF1Q9NU02 776 aa6.34□□□□□ -1.39
GYPB-215ENST00000513677 GDE1Q9NZC3 331 aa6.34□□□□□ -1.39
GYPB-215ENST00000513677 ZC3H7BQ9UGR2 993 aaKnown RBP6.34□□□□□ -1.39
GYPB-215ENST00000513677 POLR3KQ9Y2Y1 108 aaPredicted RBP6.34□□□□□ -1.39
GYPB-215ENST00000513677 U3KQE9 123 aa6.34□□□□□ -1.39
GYPB-215ENST00000513677 TRIP11Q15643 1979 aa6.34□□□□□ -1.39
GYPB-215ENST00000513677 ACACBO00763 2458 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 MAP1BP46821 2468 aaKnown RBP6.33□□□□□ -1.4
GYPB-215ENST00000513677 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 WDR27A2RRH5 827 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 SHISA7A6NL88 538 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 ZNF197O14709 1029 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 TRAPPC3O43617 180 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 NEMFO60524 1076 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 GREM1O60565 184 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 CDKL5O76039 1030 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 SLITRK5O94991 958 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 CST3P01034 146 aaPredicted RBP6.33□□□□□ -1.4
GYPB-215ENST00000513677 EDN1P05305 212 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 PSMC3P17980 439 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 KRT2P35908 639 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 CCR2P41597 374 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 PXNP49023 591 aaPredicted RBP6.33□□□□□ -1.4
GYPB-215ENST00000513677 CDR1P51861 262 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 YARSP54577 528 aaKnown RBP6.33□□□□□ -1.4
GYPB-215ENST00000513677 POU5F1BQ06416 359 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 SCRN1Q12765 414 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 TWF1Q12792 350 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 TEAD2Q15562 447 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 NAB2Q15742 525 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 CTXN3Q4LDR2 81 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 IQCEQ6IPM2 695 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 Q6ZS52 159 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 DTX1Q86Y01 620 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 MFSD2AQ8NA29 543 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 ZSCAN18Q8TBC5 510 aaPredicted RBP6.33□□□□□ -1.4
GYPB-215ENST00000513677 NELL1Q92832 810 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 ZNF274Q96GC6 653 aaPredicted RBP6.33□□□□□ -1.4
GYPB-215ENST00000513677 BORCS6Q96GS4 357 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 ZNF512Q96ME7 567 aaPredicted RBP6.33□□□□□ -1.4
GYPB-215ENST00000513677 PGLYRP2Q96PD5 576 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 C2orf40Q9H1Z8 148 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 ARRDC1-AS1Q9H2J1 176 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 FZD8Q9H461 694 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 SMOC1Q9H4F8 434 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 BRMS1Q9HCU9 246 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 ZNF334Q9HCZ1 680 aaPredicted RBP6.33□□□□□ -1.4
GYPB-215ENST00000513677 PDRG1Q9NUG6 133 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 UBP1Q9NZI7 540 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 ORC3Q9UBD5 711 aaPredicted RBP6.33□□□□□ -1.4
GYPB-215ENST00000513677 ADAM30Q9UKF2 790 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 ANGPTL2Q9UKU9 493 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 NUB1Q9Y5A7 615 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 INSL5Q9Y5Q6 135 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 COL4A2P08572 1712 aa6.33□□□□□ -1.4
GYPB-215ENST00000513677 TPRP12270 2363 aaKnown RBP6.32□□□□□ -1.4
GYPB-215ENST00000513677 KIF26AQ9ULI4 1882 aaPredicted RBP6.32□□□□□ -1.4
GYPB-215ENST00000513677 NCANO14594 1321 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 CCDC169A6NNP5 214 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 HEPACAM2A8MVW5 462 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 PODXLO00592 558 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 MED24O75448 989 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 REC8O95072 547 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 LYPLA2O95372 231 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 CHRNB1P11230 501 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 TDGF1P13385 188 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 MCM4P33991 863 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 MCM7P33993 719 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 NAMPTP43490 491 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 EVCP57679 992 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 LRRC32Q14392 662 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 PON2Q15165 354 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 CSRP2Q16527 193 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 UPP1Q16831 310 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 DCAF4L1Q3SXM0 396 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 ZNF568Q3ZCX4 644 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 N4BP2L1Q5TBK1 243 aaPredicted RBP6.32□□□□□ -1.4
GYPB-215ENST00000513677 ATF7IP2Q5U623 682 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 SLC6A19Q695T7 634 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 CENPQQ7L2Z9 268 aaPredicted RBP6.32□□□□□ -1.4
GYPB-215ENST00000513677 MCATQ8IVS2 390 aaKnown RBP6.32□□□□□ -1.4
GYPB-215ENST00000513677 MRPL41Q8IXM3 137 aaKnown RBP6.32□□□□□ -1.4
GYPB-215ENST00000513677 FBXL16Q8N461 479 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 MCPH1Q8NEM0 835 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 ZNF461Q8TAF7 563 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 SMARCD2Q92925 531 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 C18orf25Q96B23 403 aaPredicted RBP6.32□□□□□ -1.4
GYPB-215ENST00000513677 ZFYVE19Q96K21 471 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 IFT74Q96LB3 600 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 HEXIM2Q96MH2 286 aaKnown RBP6.32□□□□□ -1.4
GYPB-215ENST00000513677 UROC1Q96N76 676 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 PPP1R10Q96QC0 940 aaKnown RBP6.32□□□□□ -1.4
GYPB-215ENST00000513677 HSD17B14Q9BPX1 270 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 SPON2Q9BUD6 331 aa6.32□□□□□ -1.4
GYPB-215ENST00000513677 CCDC94Q9BW85 323 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms