RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 GIPC2Q8TF65 315 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 CTNNBL1Q8WYA6 563 aaPredicted RBP13.18□□□□□ -0.3
PDPN-210ENST00000513143 ZNF653Q96CK0 615 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 AVENQ9NQS1 362 aaPredicted RBP13.18□□□□□ -0.3
PDPN-210ENST00000513143 MAN1C1Q9NR34 630 aa13.18□□□□□ -0.3
PDPN-210ENST00000513143 CNOT8Q9UFF9 292 aaKnown RBP13.18□□□□□ -0.3
PDPN-210ENST00000513143 FAM92AA1XBS5 289 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 ZMYND10O75800 440 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 ZBED1O96006 694 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 CYP1A2P05177 515 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 CSH1P0DML2 217 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 CSH2P0DML3 217 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 HOXA9P31269 272 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 SCNN1AP37088 669 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 MRPS5P82675 430 aaKnown RBP13.17□□□□□ -0.3
PDPN-210ENST00000513143 SLC6A3Q01959 620 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 TCEAL5Q5H9L2 206 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 OR6B2Q6IFH4 312 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 GPR153Q6NV75 609 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 LLGL2Q6P1M3 1020 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 OLFML1Q6UWY5 402 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 FAM183BPQ6ZVS7 135 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 C3orf20Q8ND61 904 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 STKLD1Q8NE28 680 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 IRGQQ8WZA9 623 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 ARHGEF26Q96DR7 871 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 TTLL2Q9BWV7 592 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 ULBP1Q9BZM6 244 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 LACRTQ9GZZ8 138 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 FBXO44Q9H4M3 255 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 PARVAQ9NVD7 372 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 EHD2Q9NZN4 543 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 TFR2Q9UP52 801 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 SCML2Q9UQR0 700 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 ZKSCAN5Q9Y2L8 839 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 ASB3Q9Y575 518 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 MTCH2Q9Y6C9 303 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 DOCK6Q96HP0 2047 aa13.17□□□□□ -0.3
PDPN-210ENST00000513143 A0A0A6YYK5 440 aaPredicted RBP13.16□□□□□ -0.3
PDPN-210ENST00000513143 A0A0U1RQJ8 604 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 BTNL10A8MVZ5 291 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 SART1O43290 800 aaKnown RBP13.16□□□□□ -0.3
PDPN-210ENST00000513143 ZSCAN12O43309 604 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 ATMINO43313 823 aaPredicted RBP13.16□□□□□ -0.3
PDPN-210ENST00000513143 PAPLNO95428 1278 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 LRG1P02750 347 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 HNRNPA1P09651 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDPN-210ENST00000513143 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 HMGA1P17096 107 aaKnown RBP13.16□□□□□ -0.3
PDPN-210ENST00000513143 YWHAQP27348 245 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDPN-210ENST00000513143 DAOAP59103 153 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 USP46P62068 366 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 HYAL1Q12794 435 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 KIF5AQ12840 1032 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 ADGRE1Q14246 886 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 VEPH1Q14D04 833 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 TCEAL1Q15170 157 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 PPM1LQ5SGD2 360 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 PPP1R15BQ5SWA1 713 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 TMEM184AQ6ZMB5 413 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 SLC26A9Q7LBE3 791 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 BHLHA9Q7RTU4 235 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 PHLDB2Q86SQ0 1253 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 ITIH5Q86UX2 942 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 VN1R2Q8NFZ6 395 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 KIAA1524Q8TCG1 905 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 CLEC4CQ8WTT0 213 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 ATRIPQ8WXE1 791 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 KHSRPQ92945 711 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDPN-210ENST00000513143 PSMG2Q969U7 264 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 TRMT2BQ96GJ1 504 aaKnown RBP13.16□□□□□ -0.3
PDPN-210ENST00000513143 PIWIL1Q96J94 861 aaKnown RBP13.16□□□□□ -0.3
PDPN-210ENST00000513143 MYRFLQ96LU7 910 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 MRPL47Q9HD33 250 aaKnown RBP13.16□□□□□ -0.3
PDPN-210ENST00000513143 KCND1Q9NSA2 647 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 ASNSD1Q9NWL6 643 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 ZDHHC7Q9NXF8 308 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.16□□□□□ -0.3
PDPN-210ENST00000513143 MYO1AQ9UBC5 1043 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 DENND4CQ5VZ89 1909 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 ANAPC1Q9H1A4 1944 aa13.16□□□□□ -0.3
PDPN-210ENST00000513143 SIGLEC16A6NMB1 481 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 GOLGA8SH3BPF8 625 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 RFPL2O75678 378 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 GLI1P08151 1106 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 POU2F2P09086 479 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 RBM10P98175 930 aaKnown RBP13.15□□□□□ -0.3
PDPN-210ENST00000513143 IFRD2Q12894 506 aaPredicted RBP13.15□□□□□ -0.3
PDPN-210ENST00000513143 EFHC1Q5JVL4 640 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 HABP4Q5JVS0 413 aaKnown RBP13.15□□□□□ -0.3
PDPN-210ENST00000513143 FAM102AQ5T9C2 384 aaPredicted RBP13.15□□□□□ -0.3
PDPN-210ENST00000513143 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
PDPN-210ENST00000513143 DNAJC24Q6P3W2 148 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 ARCQ7LC44 396 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms