RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CCDC17Q96LX7 622 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 WACQ9BTA9 647 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 TRIM5Q9C035 493 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 CDH19Q9H159 772 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 NMRK2Q9NPI5 230 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 SACM1LQ9NTJ5 587 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 TRNAU1APQ9NX07 287 aaKnown RBP2.84□□□□□ -1.95
PDGFC-208ENST00000512711 TFCP2L1Q9NZI6 479 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 DNMT3BQ9UBC3 853 aaKnown RBP2.84□□□□□ -1.95
PDGFC-208ENST00000512711 TRIM38O00635 465 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 PHGDHO43175 533 aaKnown RBP2.83□□□□□ -1.96
PDGFC-208ENST00000512711 SRGAP2O75044 1071 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 GCATO75600 419 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 RASAL1O95294 804 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 A1BGP04217 495 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 CHRM5P08912 532 aaPredicted RBP2.83□□□□□ -1.96
PDGFC-208ENST00000512711 CYP19A1P11511 503 aaPredicted RBP2.83□□□□□ -1.96
PDGFC-208ENST00000512711 PRF1P14222 555 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 FOXG1P55316 489 aaPredicted RBP2.83□□□□□ -1.96
PDGFC-208ENST00000512711 FMO1Q01740 532 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 TRIM71Q2Q1W2 868 aaKnown RBP2.83□□□□□ -1.96
PDGFC-208ENST00000512711 APOA5Q6Q788 366 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 ZNF813Q6ZN06 617 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 MAEAQ7L5Y9 396 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 SPARTQ8N0X7 666 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 C11orf44Q8N8P7 122 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 PRSS3P2Q8NHM4 247 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 MAP4K1Q92918 833 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 RUNDC1Q96C34 613 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 COQ8BQ96D53 544 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 PRR11Q96HE9 360 aaPredicted RBP2.83□□□□□ -1.96
PDGFC-208ENST00000512711 PUS7Q96PZ0 661 aaKnown RBP2.83□□□□□ -1.96
PDGFC-208ENST00000512711 TMEM79Q9BSE2 394 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 KRTAP1-5Q9BYS1 174 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 ZNF518BQ9C0D4 1074 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 A1CFQ9NQ94 594 aaKnown RBP2.83□□□□□ -1.96
PDGFC-208ENST00000512711 TMEM184CQ9NVA4 438 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 MGAT4CQ9UBM8 478 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 L1RE1Q9UN81 338 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 USP22Q9UPT9 525 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 CDY1Q9Y6F8 540 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 TTC3P53804 2025 aa2.83□□□□□ -1.96
PDGFC-208ENST00000512711 hCG_2014768A0A024R1R8 64 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 CFAP69A5D8W1 941 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 UBE2Q2LH0YL09 131 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 PYCARD-AS1I3L0S3 204 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 EXOC5O00471 708 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 RGS10O43665 173 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 RRP9O43818 475 aaKnown RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 RFPL1O75677 317 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 CREB1P16220 341 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 NTSR1P30989 418 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 PRKAR1BP31321 381 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 MCM5P33992 734 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 PTDSS1P48651 473 aaKnown RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 TIRAPP58753 221 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 KRTAP10-6P60371 365 aaPredicted RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 SATB1Q01826 763 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 RAB32Q13637 225 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 FHL3Q13643 280 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 ZNF268Q14587 947 aaPredicted RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 CNN3Q15417 329 aaKnown RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 RBMS2Q15434 407 aaKnown RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 CERKLQ49MI3 558 aaPredicted RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 CERCAMQ5T4B2 595 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 PXDC1Q5TGL8 231 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 CACHD1Q5VU97 1274 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 SHC4Q6S5L8 630 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 RANBP10Q6VN20 620 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 PTCHD4Q6ZW05 846 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 KRT73Q86Y46 540 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 SFTPA1Q8IWL2 248 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 FAM177A1Q8N128 213 aaPredicted RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 C16orf52Q8NHV5 167 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 MAFAQ8NHW3 353 aaPredicted RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 HMCESQ96FZ2 354 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 KAZALD1Q96I82 304 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 SIGLEC11Q96RL6 698 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 STK31Q9BXU1 1019 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 TMEM60Q9H2L4 133 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 TYW1Q9NV66 732 aaKnown RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 ZSCAN32Q9NX65 697 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 MTMR4Q9NYA4 1195 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 COL20A1Q9P218 1284 aa2.82□□□□□ -1.96
PDGFC-208ENST00000512711 DDX20Q9UHI6 824 aaKnown RBP2.82□□□□□ -1.96
PDGFC-208ENST00000512711 E2F8A0AVK6 867 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 TRIM43BA6NCK2 446 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 CAPN8A6NHC0 703 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 RAB27BO00194 218 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 PSMD9O00233 223 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 CLIC1O00299 241 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 IKBKBO14920 756 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 DSCR3O14972 297 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 CD3EAPO15446 510 aaKnown RBP2.81□□□□□ -1.96
PDGFC-208ENST00000512711 RASSF9O75901 435 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 FGBP02675 491 aa2.81□□□□□ -1.96
PDGFC-208ENST00000512711 PARP1P09874 1014 aaKnown RBP2.81□□□□□ -1.96
PDGFC-208ENST00000512711 ZKSCAN1P17029 563 aaPredicted RBP2.81□□□□□ -1.96
PDGFC-208ENST00000512711 GATMP50440 423 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms