RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 PCOLCE2Q9UKZ9 415 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 CDH9Q9ULB4 789 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 LIMCH1Q9UPQ0 1083 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 A0A1B0GTW7 788 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 TISP43B9A030 160 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 SLC26A4O43511 780 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 TULP3O75386 442 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 OLFM2O95897 454 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 USP46P62068 366 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 CYP4F3Q08477 520 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 GRIK2Q13002 908 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 CCDC142Q17RM4 750 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 ANO4Q32M45 955 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 OSTM1Q86WC4 334 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 SCUBE3Q8IX30 993 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 CHPFQ8IZ52 775 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 C1orf127Q8N9H9 656 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 MYLPFQ96A32 169 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 CDC6Q99741 560 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 SYT15Q9BQS2 421 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 FAM213AQ9BRX8 229 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 TTLL2Q9BWV7 592 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 SH3BP1Q9Y3L3 701 aa13.4□□□□□ -0.26
DDX41-215ENST00000512431 PLXND1Q9Y4D7 1925 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 LAMA5O15230 3695 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 A0A087WV48 116 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 MEI4A8MW99 385 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 TK2O00142 265 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 HOXC11O43248 304 aaPredicted RBP13.39□□□□□ -0.27
DDX41-215ENST00000512431 CBFA2T3O75081 653 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 ATP2C2O75185 946 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 CER1O95813 267 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 LDHAP00338 332 aaKnown RBP13.39□□□□□ -0.27
DDX41-215ENST00000512431 OAS1P00973 400 aaKnown RBP13.39□□□□□ -0.27
DDX41-215ENST00000512431 NDUFV2P19404 249 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 MAOBP27338 520 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 UBA7P41226 1012 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 PSMC1P62191 440 aaKnown RBP13.39□□□□□ -0.27
DDX41-215ENST00000512431 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
DDX41-215ENST00000512431 TAF10Q12962 218 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 SOWAHAQ2M3V2 549 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 RILPL1Q5EBL4 403 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 IL27RAQ6UWB1 636 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 PHTF2Q8N3S3 785 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 TERB1Q8NA31 727 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 IPO4Q8TEX9 1081 aaKnown RBP13.39□□□□□ -0.27
DDX41-215ENST00000512431 HVCN1Q96D96 273 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 AK8Q96MA6 479 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 ST6GALNAC4Q9H4F1 302 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 CACNA2D2Q9NY47 1150 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 RBAKQ9NYW8 714 aaPredicted RBP13.39□□□□□ -0.27
DDX41-215ENST00000512431 EXOC7Q9UPT5 735 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 STARD13Q9Y3M8 1113 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 PCDH15Q96QU1 1955 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 CACNA1EQ15878 2313 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 PI4KAP42356 2102 aa13.39□□□□□ -0.27
DDX41-215ENST00000512431 A0A1W2PQF6 199 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 TRABD2BA6NFA1 517 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 GOLGA8CPA6NN73 597 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 HCRTO43612 131 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 PDGFRBP09619 1106 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 TMEM191BP0C7N4 346 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 ZNF883P0CG24 379 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 MATKP42679 507 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 ABCG1P45844 678 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 IFRD2Q12894 506 aaPredicted RBP13.38□□□□□ -0.27
DDX41-215ENST00000512431 MCM6Q14566 821 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 SUZ12Q15022 739 aaKnown RBP13.38□□□□□ -0.27
DDX41-215ENST00000512431 ARL6IP4Q66PJ3 421 aaKnown RBP13.38□□□□□ -0.27
DDX41-215ENST00000512431 GRAMD4Q6IC98 578 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 HS2ST1Q7LGA3 356 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 BRSK2Q8IWQ3 736 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 ETFBKMTQ8IXQ9 262 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 KRI1Q8N9T8 703 aaKnown RBP13.38□□□□□ -0.27
DDX41-215ENST00000512431 PDZD8Q8NEN9 1154 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 RHBDD1Q8TEB9 315 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 SCFD1Q8WVM8 642 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 SLC39A7Q92504 469 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 C8orf48Q96LL4 319 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 XPO6Q96QU8 1125 aaKnown RBP13.38□□□□□ -0.27
DDX41-215ENST00000512431 FIZ1Q96SL8 496 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 MIR1-1HGQ9H1L0 117 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 GAREM1Q9H706 876 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 PRDM16Q9HAZ2 1276 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 SPHK2Q9NRA0 654 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 TM7SF3Q9NS93 570 aa13.38□□□□□ -0.27
DDX41-215ENST00000512431 HELZP42694 1942 aaKnown RBP13.38□□□□□ -0.27
DDX41-215ENST00000512431 ANAPC1Q9H1A4 1944 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 F8VP50 259 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 LMO2P25791 158 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 CD6P30203 668 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 KIAA1324Q6UXG2 1013 aaKnown RBP13.37□□□□□ -0.27
DDX41-215ENST00000512431 ZNF720Q7Z2F6 126 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 PDCD7Q8N8D1 485 aaKnown RBP13.37□□□□□ -0.27
DDX41-215ENST00000512431 NOC3LQ8WTT2 800 aaKnown RBP13.37□□□□□ -0.27
DDX41-215ENST00000512431 ERLEC1Q96DZ1 483 aa13.37□□□□□ -0.27
DDX41-215ENST00000512431 SAAL1Q96ER3 474 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms