RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 SLC4A5Q9BY07 1137 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 USP29Q9HBJ7 922 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 VTA1Q9NP79 307 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.64□□□□□ -0.87
CPNE4-210ENST00000512332 PAK5Q9P286 719 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 GGT7Q9UJ14 662 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 IQANK1A0A1B0GTG1 560 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 BANF1O75531 89 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 CAPN15O75808 1086 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 PFKMP08237 780 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 CYP3A5P20815 502 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 IL4RP24394 825 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 GRM5P41594 1212 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 PSMC4P43686 418 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 PARP6Q2NL67 630 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 BBS9Q3SYG4 887 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 SLC9A4Q6AI14 798 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 TRNP1Q6NT89 227 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 MTHFD1LQ6UB35 978 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 CAPN12Q6ZSI9 719 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 PLD5Q8N7P1 536 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 UBA3Q8TBC4 463 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 SLC44A1Q8WWI5 657 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 APBB2Q92870 758 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 ZBTB10Q96DT7 871 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 TMEM237Q96Q45 408 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 C10orf88Q9H8K7 445 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 BAIAP2L1Q9UHR4 511 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 TSPAN16Q9UKR8 245 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 MCM3APO60318 1980 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 BCLAF3A2AJT9 711 aaKnown RBP9.63□□□□□ -0.87
CPNE4-210ENST00000512332 E5RJQ4 531 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 C2CD2LO14523 706 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 MDM4O15151 490 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 TSPAN1O60635 241 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 DDNO94850 711 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-210ENST00000512332 DHRS4L1P0CG22 281 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 DESP17661 470 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 IGBP1P78318 339 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 BASP1P80723 227 aaKnown RBP9.63□□□□□ -0.87
CPNE4-210ENST00000512332 SLC18A2Q05940 514 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 ZNF792Q3KQV3 632 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 CCDC14Q49A88 953 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 SLC45A4Q5BKX6 768 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 OR6B2Q6IFH4 312 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 OLFML1Q6UWY5 402 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 MAMDC4Q6UXC1 1216 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 SH2D5Q6ZV89 423 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 FAM183BPQ6ZVS7 135 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 ARCQ7LC44 396 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 ZNF410Q86VK4 478 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 CHSY1Q86X52 802 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 NLGN2Q8NFZ4 835 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 C10orf82Q8WW14 230 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 INPP5DQ92835 1189 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 FAF2Q96CS3 445 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 RAB3IPQ96QF0 476 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-210ENST00000512332 C16orf70Q9BSU1 422 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 LRMDAQ9H2I8 198 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 SLCO1B3Q9NPD5 702 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 AKT3Q9Y243 479 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 CHKBQ9Y259 395 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 TCRBV9S1A1TA0A576 114 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 TRAFD1O14545 582 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-210ENST00000512332 TRDMT1O14717 391 aaKnown RBP9.63□□□□□ -0.87
CPNE4-210ENST00000512332 IL1BP01584 269 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 KRT16P08779 473 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 GSTA2P09210 222 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 CCND1P24385 295 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 SCNN1AP37088 669 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 ELK3P41970 407 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 RASSF2P50749 326 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 SLC6A3Q01959 620 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 MMRN1Q13201 1228 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 DCAF4L1Q3SXM0 396 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 SH3PXD2AQ5TCZ1 1133 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 OTOAQ7RTW8 1153 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 APBB1IPQ7Z5R6 666 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-210ENST00000512332 ZNF467Q7Z7K2 595 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-210ENST00000512332 CEP57Q86XR8 500 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 MCUQ8NE86 351 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-210ENST00000512332 TCP10LQ8TDR4 215 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 SLC35F5Q8WV83 523 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 SPOCK2Q92563 424 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 LRRC39Q96DD0 335 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 CPB2Q96IY4 423 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 ZNF670Q9BS34 389 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 MYLK2Q9H1R3 596 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 EBF2Q9HAK2 575 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 GTF2IRD1Q9UHL9 959 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 ZNF180Q9UJW8 692 aa9.63□□□□□ -0.87
CPNE4-210ENST00000512332 APOL1O14791 398 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 HNRNPCL1O60812 293 aaKnown RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 CSDE1O75534 798 aaKnown RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 WFS1O76024 890 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 TGDSO95455 350 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 MT-ND3P03897 115 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 FGFR1P11362 822 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms