RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 TM9SF1O15321 606 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 KLHL41O60662 606 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 JCHAINP01591 159 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 INSRRP14616 1297 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 ACADSP16219 412 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 RPA3P35244 121 aaPredicted RBP8.34□□□□□ -1.07
NEK1-208ENST00000512193 FDFT1P37268 417 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 DYNC1I2Q13409 638 aaKnown RBP8.34□□□□□ -1.07
NEK1-208ENST00000512193 MAMLD1Q13495 774 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 SV2CQ496J9 727 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 ZCWPW2Q504Y3 356 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 POTEAQ6S8J7 498 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 ZCCHC23Q6ZST2 131 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 VSIG10LQ86VR7 867 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 ZCCHC9Q8N567 271 aaKnown RBP8.34□□□□□ -1.07
NEK1-208ENST00000512193 POU5F2Q8N7G0 328 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 PCDHB18PQ96TA0 734 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 SH3GL2Q99962 352 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 EML4Q9HC35 981 aaKnown RBP8.34□□□□□ -1.07
NEK1-208ENST00000512193 RNF19AQ9NV58 838 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 VAV3Q9UKW4 847 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 ARHGAP26Q9UNA1 814 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 CDYLQ9Y232 598 aa8.34□□□□□ -1.07
NEK1-208ENST00000512193 CYP1A2P05177 515 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 RALBP11234 206 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 CYP2F1P24903 491 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 DSG3P32926 999 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 PAN2Q504Q3 1202 aaKnown RBP8.34□□□□□ -1.08
NEK1-208ENST00000512193 NAPEPLDQ6IQ20 393 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 KATNAL2Q8IYT4 538 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 SAMD3Q8N6K7 520 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 EFHBQ8N7U6 833 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 KREMEN1Q96MU8 473 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 SRPK1Q96SB4 655 aaKnown RBP8.34□□□□□ -1.08
NEK1-208ENST00000512193 CHST12Q9NRB3 414 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 TJP2Q9UDY2 1190 aa8.34□□□□□ -1.08
NEK1-208ENST00000512193 IFT172Q9UG01 1749 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 TCRBV7S2A1N4TA0A589 114 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 KCNK1O00180 336 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 BANF1O75531 89 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 AP1G2O75843 785 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 NUDT17P0C025 328 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 SNHG28P0DPA3 235 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 KCNA4P22459 653 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 PCSK1P29120 753 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 BIRC2Q13490 618 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 KBTBD12Q3ZCT8 623 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 FOXR2Q6PJQ5 311 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 CES3Q6UWW8 571 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 STRA8Q7Z7C7 330 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 SLFN11Q7Z7L1 901 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 GPRC5AQ8NFJ5 357 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 OR5B17Q8NGF7 314 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 AGAP11Q8TF27 550 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 SEMA4DQ92854 862 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 CENPTQ96BT3 561 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 FAM136AQ96C01 138 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 SH3GL3Q99963 347 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 UNKQ9C0B0 810 aaKnown RBP8.33□□□□□ -1.08
NEK1-208ENST00000512193 FHDC1Q9C0D6 1143 aaPredicted RBP8.33□□□□□ -1.08
NEK1-208ENST00000512193 LRRC19Q9H756 370 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 PPME1Q9Y570 386 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 SYCE1LA8MT33 242 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 TNPO2O14787 897 aaKnown RBP8.33□□□□□ -1.08
NEK1-208ENST00000512193 ETFBP38117 255 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 TAS2R40P59535 323 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 CDC42EP1Q00587 391 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 PDAP1Q13442 181 aaKnown RBP8.33□□□□□ -1.08
NEK1-208ENST00000512193 DGKZQ13574 1117 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 ITGA9Q13797 1035 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 UGCGQ16739 394 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 SNX30Q5VWJ9 437 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 C16orf89Q6UX73 402 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 YTHDF3Q7Z739 585 aaKnown RBP8.33□□□□□ -1.08
NEK1-208ENST00000512193 ANKRD13AQ8IZ07 590 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 COLGALT1Q8NBJ5 622 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 CATSPER1Q8NEC5 780 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 PBXIP1Q96AQ6 731 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 WDCPQ9H6R7 721 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 BCAS3Q9H6U6 928 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 CYP4F12Q9HCS2 524 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 C15orf41Q9Y2V0 281 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 MRC1P22897 1456 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 AP3B1O00203 1094 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 DNAJC8O75937 253 aaPredicted RBP8.33□□□□□ -1.08
NEK1-208ENST00000512193 B3GAT3O94766 335 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 MT-CO1P00395 513 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 CPA3P15088 417 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 AMPD1P23109 780 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 RBL1P28749 1068 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 TM4SF1P30408 202 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 SNAPC2Q13487 334 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 ZNF268Q14587 947 aaPredicted RBP8.33□□□□□ -1.08
NEK1-208ENST00000512193 R3HDM1Q15032 1099 aaKnown RBP8.33□□□□□ -1.08
NEK1-208ENST00000512193 DENND1BQ6P3S1 775 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 RFWD2Q8NHY2 731 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 CERKQ8TCT0 537 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 NAT9Q9BTE0 207 aa8.33□□□□□ -1.08
NEK1-208ENST00000512193 SPATC1LQ9H0A9 340 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms