RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 LYSMD3Q7Z3D4 306 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 POLNQ7Z5Q5 900 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 TTC30AQ86WT1 665 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 XYLT1Q86Y38 959 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 PASD1Q8IV76 773 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 CMTR2Q8IYT2 770 aaKnown RBP9.58□□□□□ -0.88
NR1I3-230ENST00000511944 RASGEF1CQ8N431 466 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 FEZF2Q8TBJ5 459 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 MYCBPAPQ8TBZ2 947 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 ACTRT1Q8TDG2 376 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 RUBCNQ92622 972 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 TOP1MTQ969P6 601 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 SCLYQ96I15 445 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 FUBP3Q96I24 572 aaKnown RBP eCLIP9.58□□□□□ -0.88
NR1I3-230ENST00000511944 CEP295NLQ96MC4 621 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 SYT15Q9BQS2 421 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 TRIM62Q9BVG3 475 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 DUSP16Q9BY84 665 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 MCOLN1Q9GZU1 580 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 CSNK1G1Q9HCP0 422 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 ASNSD1Q9NWL6 643 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 DDX43Q9NXZ2 648 aaKnown RBP9.58□□□□□ -0.88
NR1I3-230ENST00000511944 ANAPC7Q9UJX3 599 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 ADAM28Q9UKQ2 775 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 NOVA2Q9UNW9 492 aaKnown RBP9.58□□□□□ -0.88
NR1I3-230ENST00000511944 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.58□□□□□ -0.88
NR1I3-230ENST00000511944 ALG6Q9Y672 507 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 SCN1AP35498 2009 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 TTC3P53804 2025 aa9.58□□□□□ -0.88
NR1I3-230ENST00000511944 TRIP11Q15643 1979 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 TSC2P49815 1807 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 TDRD15B5MCY1 1934 aaKnown RBP9.57□□□□□ -0.88
NR1I3-230ENST00000511944 CTAGE15A4D2H0 777 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 DDHD2O94830 711 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 FTCDO95954 541 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 ALDH2P05091 517 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 FAM200BP0CF97 657 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 CTAGE8P0CG41 777 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 KRT3P12035 628 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 NPR3P17342 541 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 PAFAH1B1P43034 410 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 PSMC1P62191 440 aaKnown RBP9.57□□□□□ -0.88
NR1I3-230ENST00000511944 YWHAHQ04917 246 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-230ENST00000511944 NFE2Q16621 373 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-230ENST00000511944 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.57□□□□□ -0.88
NR1I3-230ENST00000511944 TBCELQ5QJ74 424 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 OVOS1Q6IE37 1185 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 C4orf50Q6ZRC1 276 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 SLC26A9Q7LBE3 791 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 CTAGE6Q86UF2 777 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 OSTM1Q86WC4 334 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 ZNF280BQ86YH2 543 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 CREG2Q8IUH2 290 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 CTAGE4Q8IX94 777 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 DCP1BQ8IZD4 617 aaKnown RBP9.57□□□□□ -0.88
NR1I3-230ENST00000511944 FUKQ8N0W3 1084 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 C2orf15Q8WU43 125 aaKnown RBP9.57□□□□□ -0.88
NR1I3-230ENST00000511944 ZNF689Q96CS4 500 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-230ENST00000511944 VWCEQ96DN2 955 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 SMARCD1Q96GM5 515 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 CPXM1Q96SM3 734 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 PKMYT1Q99640 499 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 SYNCQ9H7C4 482 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 NRDE2Q9H7Z3 1164 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 RC3H2Q9HBD1 1191 aaKnown RBP9.57□□□□□ -0.88
NR1I3-230ENST00000511944 IL23AQ9NPF7 189 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 PRKAG2Q9UGJ0 569 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 CYTH4Q9UIA0 394 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 NME7Q9Y5B8 376 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 PCDHA3Q9Y5H8 950 aa9.57□□□□□ -0.88
NR1I3-230ENST00000511944 TRIM43BA6NCK2 446 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 H7C4K7 107 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 PGRMC1O00264 195 aaKnown RBP9.56□□□□□ -0.88
NR1I3-230ENST00000511944 ENC1O14682 589 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 NRP1O14786 923 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 SPOPO43791 374 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 TADA2AO75478 443 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 TADA3O75528 432 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 EFEMP2O95967 443 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 LAG3P18627 525 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 FGFR3P22607 806 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 LMO2P25791 158 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 PCK1P35558 622 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 PPM1AP35813 382 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 MAGEA11P43364 429 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 OR1G1P47890 313 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 SEC13P55735 322 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 FOXK2Q01167 660 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 PTSQ03393 145 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 PDE4CQ08493 712 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 MRPL58Q14197 206 aaKnown RBP9.56□□□□□ -0.88
NR1I3-230ENST00000511944 EFHC1Q5JVL4 640 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 CCDC181Q5TID7 509 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 ZNF280DQ6N043 979 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 PSRC1Q6PGN9 363 aaPredicted RBP9.56□□□□□ -0.88
NR1I3-230ENST00000511944 DCUN1D2Q6PH85 259 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 ANKS3Q6ZW76 656 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 BEND5Q7L4P6 421 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 FAM35AQ86V20 835 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 VSIG1Q86XK7 387 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms