RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CUL2Q13617 745 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 PDGFRLQ15198 375 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 EML3Q32P44 896 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 PDZD8Q8NEN9 1154 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 OSCP1Q8WVF1 389 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 KAT5Q92993 513 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 WBP2Q969T9 261 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 TMEM176AQ96HP8 235 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 MED15Q96RN5 788 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 ECT2Q9H8V3 914 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 METTL14Q9HCE5 456 aaKnown RBP14.05□□□□□ -0.16
RNF4-215ENST00000511843 FBRSL1Q9HCM7 1045 aaKnown RBP14.05□□□□□ -0.16
RNF4-215ENST00000511843 C2orf42Q9NWW7 574 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 IL37Q9NZH6 218 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 FRYLO94915 3013 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 EML5Q05BV3 1969 aa14.05□□□□□ -0.16
RNF4-215ENST00000511843 TRIM21P19474 475 aaKnown RBP14.04□□□□□ -0.16
RNF4-215ENST00000511843 ACO1P21399 889 aaKnown RBP14.04□□□□□ -0.16
RNF4-215ENST00000511843 GJA4P35212 333 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 MAGEA9P43362 315 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 PPP3CCP48454 512 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 PDE6CP51160 858 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 MLLT6P55198 1093 aaPredicted RBP14.04□□□□□ -0.16
RNF4-215ENST00000511843 SATB1Q01826 763 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 HECTD3Q5T447 861 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 FSTL4Q6MZW2 842 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 PKN3Q6P5Z2 889 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 TRIM59Q8IWR1 403 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 CPA6Q8N4T0 437 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 TRIML1Q8N9V2 468 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 MSANTD3Q96H12 275 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 CLSTN2Q9H4D0 955 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 NMUR1Q9HB89 426 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 OSER1Q9NX31 292 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 NUDT5Q9UKK9 219 aa14.04□□□□□ -0.16
RNF4-215ENST00000511843 ZFHX2Q9C0A1 2572 aaPredicted RBP14.03□□□□□ -0.16
RNF4-215ENST00000511843 FAM92AA1XBS5 289 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 PRR23AA6NEV1 266 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 PROB1E7EW31 1015 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 TBX18O95935 607 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 ZDHHC11BP0C7U3 371 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 IRF1P10914 325 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 KCNH2Q12809 1159 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 CCINQ13939 588 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 LRRC32Q14392 662 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 GOLGA7BQ2TAP0 167 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 CREBRFQ8IUR6 639 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 ARHGEF19Q8IW93 802 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 UBR7Q8N806 425 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 LMO3Q8TAP4 145 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 OVCA2Q8WZ82 227 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 ATP2A3Q93084 1043 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 NKD2Q969F2 451 aaPredicted RBP14.03□□□□□ -0.16
RNF4-215ENST00000511843 ZFRQ96KR1 1074 aaKnown RBP14.03□□□□□ -0.16
RNF4-215ENST00000511843 DUSP16Q9BY84 665 aa14.03□□□□□ -0.16
RNF4-215ENST00000511843 PRMT8Q9NR22 394 aaPredicted RBP14.03□□□□□ -0.16
RNF4-215ENST00000511843 POLR3BQ9NW08 1133 aaPredicted RBP14.03□□□□□ -0.16
RNF4-215ENST00000511843 WDR87Q6ZQQ6 2873 aa14.02□□□□□ -0.16
RNF4-215ENST00000511843 PIEZO1Q92508 2521 aa14.02□□□□□ -0.16
RNF4-215ENST00000511843 A0A1W2PQH9 124 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 ANTXRLA6NF34 631 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 TULP2O00295 520 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 MDM4O15151 490 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 TLR5O60602 858 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 EGFP01133 1207 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 CD19P15391 556 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 TCF3P15923 654 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 PFKLP17858 780 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 GALK1P51570 392 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 GAB4Q2WGN9 574 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 TMEM196Q5HYL7 178 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 FOXR2Q6PJQ5 311 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 RRAGAQ7L523 313 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 TTC30AQ86WT1 665 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 PPM1KQ8N3J5 372 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 EZH1Q92800 747 aaPredicted RBP14.02□□□□□ -0.17
RNF4-215ENST00000511843 FAXDC2Q96IV6 333 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 NT5C1BQ96P26 610 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 NACA2Q9H009 215 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 FBXO44Q9H4M3 255 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 TLR8Q9NR97 1041 aaKnown RBP14.02□□□□□ -0.17
RNF4-215ENST00000511843 LMBRD1Q9NUN5 540 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 COMMD8Q9NX08 183 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 RWDD2AQ9UIY3 292 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 FBXO4Q9UKT5 387 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 SCML2Q9UQR0 700 aa14.02□□□□□ -0.17
RNF4-215ENST00000511843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.02□□□□□ -0.17
RNF4-215ENST00000511843 CFAP54Q96N23 3096 aa14.01□□□□□ -0.17
RNF4-215ENST00000511843 RNF225M0QZC1 329 aaPredicted RBP14.01□□□□□ -0.17
RNF4-215ENST00000511843 TRDMT1O14717 391 aaKnown RBP14.01□□□□□ -0.17
RNF4-215ENST00000511843 NFATC1O95644 943 aa14.01□□□□□ -0.17
RNF4-215ENST00000511843 AFPP02771 609 aaKnown RBP14.01□□□□□ -0.17
RNF4-215ENST00000511843 CYP17A1P05093 508 aa14.01□□□□□ -0.17
RNF4-215ENST00000511843 TDGF1P13385 188 aa14.01□□□□□ -0.17
RNF4-215ENST00000511843 KIF11P52732 1056 aa14.01□□□□□ -0.17
RNF4-215ENST00000511843 MARSP56192 900 aaKnown RBP14.01□□□□□ -0.17
RNF4-215ENST00000511843 DMWDQ09019 674 aa14.01□□□□□ -0.17
RNF4-215ENST00000511843 DPCR1Q3MIW9 517 aa14.01□□□□□ -0.17
RNF4-215ENST00000511843 DGKKQ5KSL6 1271 aa14.01□□□□□ -0.17
RNF4-215ENST00000511843 SNX30Q5VWJ9 437 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms