RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 ECI2O75521 394 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 PBX1P40424 430 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 ACADSBP45954 432 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 PSEN1P49768 467 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 TKTL1P51854 596 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 ADIGQ0VDE8 80 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 FAM78AQ5JUQ0 283 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 SNX30Q5VWJ9 437 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 TXNDC8Q6A555 127 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 DENND1BQ6P3S1 775 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 RNF135Q8IUD6 432 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 CMTM8Q8IZV2 173 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 SCML4Q8N228 414 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 MAB21L3Q8N8X9 362 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 STK32AQ8WU08 396 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 SLC35F5Q8WV83 523 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 ELSPBP1Q96BH3 223 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 HSFY1Q96LI6 401 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 TTYH3Q9C0H2 523 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 LHX5Q9H2C1 402 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 PDCL3Q9H2J4 239 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 KCNK12Q9HB15 430 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 ZFP14Q9HCL3 533 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 CYLDQ9NQC7 956 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 SORCS3Q9UPU3 1222 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 USP3Q9Y6I4 520 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 NUMBLQ9Y6R0 609 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 NCOR1O75376 2440 aa13.54□□□□□ -0.24
COL6A6-203ENST00000511332 COL4A2P08572 1712 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 A0A1W2PQJ5 194 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 TULP2O00295 520 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 DPYSL4O14531 572 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 FBXO21O94952 628 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 LSM8O95777 96 aaKnown RBP13.53□□□□□ -0.24
COL6A6-203ENST00000511332 ZBED1O96006 694 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 ABL1P00519 1130 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 OAS1P00973 400 aaKnown RBP13.53□□□□□ -0.24
COL6A6-203ENST00000511332 CKMP06732 381 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 USP17L7P0C7H9 530 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 ZDHHC11BP0C7U3 371 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 FERP16591 822 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 FCARP24071 287 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 GPD2P43304 727 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 SNX16P57768 344 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 PDCLQ13371 301 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 TRIM14Q14142 442 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 ZNF268Q14587 947 aaPredicted RBP13.53□□□□□ -0.24
COL6A6-203ENST00000511332 PTPN21Q16825 1174 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 PMF1Q6P1K2 205 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 SARM1Q6SZW1 724 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 PARM1Q6UWI2 310 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 TADA2BQ86TJ2 420 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 NOP9Q86U38 636 aaKnown RBP13.53□□□□□ -0.24
COL6A6-203ENST00000511332 PASD1Q8IV76 773 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 MSANTD4Q8NCY6 345 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 BAP1Q92560 729 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 FGF14Q92915 247 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 ZSWIM3Q96MP5 696 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 CDK5RAP1Q96SZ6 601 aaKnown RBP13.53□□□□□ -0.24
COL6A6-203ENST00000511332 KXD1Q9BQD3 176 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 SLC46A2Q9BY10 475 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 NUCKS1Q9H1E3 243 aaKnown RBP13.53□□□□□ -0.24
COL6A6-203ENST00000511332 CNGB3Q9NQW8 809 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 ST7Q9NRC1 585 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 OBP2AQ9NY56 170 aa13.53□□□□□ -0.24
COL6A6-203ENST00000511332 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL6A6-203ENST00000511332 VCANP13611 3396 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 C2orf78A6NCI8 922 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 LRRC53A6NM62 1247 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 SART1O43290 800 aaKnown RBP13.52□□□□□ -0.25
COL6A6-203ENST00000511332 OLFM2O95897 454 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 ASGR2P07307 311 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 RGS7P49802 495 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 PLCB2Q00722 1185 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 CDR2Q01850 454 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 TDGQ13569 410 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 HECTD3Q5T447 861 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 PM20D1Q6GTS8 502 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 TRIM72Q6ZMU5 477 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 ARID3BQ8IVW6 561 aaPredicted RBP13.52□□□□□ -0.25
COL6A6-203ENST00000511332 CELF5Q8N6W0 485 aaKnown RBP13.52□□□□□ -0.25
COL6A6-203ENST00000511332 TMEM35BQ8NCS4 154 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 C1orf131Q8NDD1 294 aaKnown RBP13.52□□□□□ -0.25
COL6A6-203ENST00000511332 ZNF397Q8NF99 534 aaPredicted RBP13.52□□□□□ -0.25
COL6A6-203ENST00000511332 IPO4Q8TEX9 1081 aaKnown RBP13.52□□□□□ -0.25
COL6A6-203ENST00000511332 DEPDC1BQ8WUY9 529 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 IRGQQ8WZA9 623 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 GOLGA1Q92805 767 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 COL25A1Q9BXS0 654 aaPredicted RBP13.52□□□□□ -0.25
COL6A6-203ENST00000511332 ULBP1Q9BZM6 244 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 NACA2Q9H009 215 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 RBSNQ9H1K0 784 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 CD320Q9NPF0 282 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 TDP1Q9NUW8 608 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 NAGPAQ9UK23 515 aa13.52□□□□□ -0.25
COL6A6-203ENST00000511332 NOCTQ9UK39 431 aaKnown RBP13.52□□□□□ -0.25
COL6A6-203ENST00000511332 A0A1W2PQH9 124 aa13.51□□□□□ -0.25
COL6A6-203ENST00000511332 TNFRSF10AO00220 468 aa13.51□□□□□ -0.25
COL6A6-203ENST00000511332 TLR5O60602 858 aa13.51□□□□□ -0.25
COL6A6-203ENST00000511332 PRAMEF12O95522 483 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms