RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 CCSAPQ6IQ19 270 aaPredicted RBP13.05□□□□□ -0.32
LIN54-210ENST00000510877 EDEM1Q92611 657 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 CASD1Q96PB1 797 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 ASNSD1Q9NWL6 643 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 CPQQ9Y646 472 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 C2orf71A6NGG8 1288 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 FMO5P49326 533 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 KRT83P78385 493 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 DBN1Q16643 649 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 CNGA4Q8IV77 575 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 SH3RF2Q8TEC5 729 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 CISHQ9NSE2 258 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 MUTYHQ9UIF7 546 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 GOLGA8CPA6NN73 597 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 ZW10O43264 779 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 MGEA5O60502 916 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 ATP2C2O75185 946 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 TRIM14Q14142 442 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 BRD3Q15059 726 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 FAM187BQ17R55 369 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 SLC10A6Q3KNW5 377 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 INAVAQ3KP66 663 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 C10orf76Q5T2E6 689 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 STN1Q9H668 368 aaKnown RBP13.04□□□□□ -0.32
LIN54-210ENST00000510877 LMAN1LQ9HAT1 526 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 IFNKQ9P0W0 207 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 GRAP2O75791 330 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 RHOCP08134 193 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 ATF2P15336 505 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 GPR17Q13304 367 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 EOGTQ5NDL2 527 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 STMN4Q9H169 189 aaPredicted RBP13.04□□□□□ -0.32
LIN54-210ENST00000510877 GDE1Q9NZC3 331 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 IGKV6D-21A0A0A0MT36 114 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 FAM86C2PA6NEL3 165 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 HEPACAM2A8MVW5 462 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 IL9P15248 144 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 GTF2H1P32780 548 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 NTHL1P78549 312 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 ARHGEF7Q14155 803 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 TSNAXIP1Q2TAA8 658 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 CPLX4Q7Z7G2 160 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 ADHFE1Q8IWW8 467 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 SERPINB11Q96P15 392 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 TELO2Q9Y4R8 837 aa13.04□□□□□ -0.32
LIN54-210ENST00000510877 TISP43B9A030 160 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 SOAT2O75908 522 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 RHOBTB3O94955 611 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 F9P00740 461 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 THOP1P52888 689 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 NCKAP1LP55160 1127 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 MTA1Q13330 715 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 TERF2Q15554 542 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 DUSP6Q16828 381 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 CCDC33Q8N5R6 958 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 MBOAT7Q96N66 472 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 THAP9Q9H5L6 903 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 WDCPQ9H6R7 721 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 F8W8V4 182 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 ARL1P40616 181 aaPredicted RBP13.03□□□□□ -0.32
LIN54-210ENST00000510877 DSG1Q02413 1049 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 BSPRYQ5W0U4 402 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 SKA2Q8WVK7 121 aaPredicted RBP13.03□□□□□ -0.32
LIN54-210ENST00000510877 PIGKQ92643 395 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 FUBP3Q96I24 572 aaKnown RBP eCLIP13.03□□□□□ -0.324e-12■■■■■ 27.5
LIN54-210ENST00000510877 TTC1Q99614 292 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
LIN54-210ENST00000510877 CDV3Q9UKY7 258 aaKnown RBP13.03□□□□□ -0.32
LIN54-210ENST00000510877 GADD45BO75293 160 aaPredicted RBP13.03□□□□□ -0.32
LIN54-210ENST00000510877 LUC7L3O95232 432 aaKnown RBP13.03□□□□□ -0.32
LIN54-210ENST00000510877 PCK1P35558 622 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 SIM2Q14190 667 aaPredicted RBP13.03□□□□□ -0.32
LIN54-210ENST00000510877 CCDC14Q49A88 953 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 GPR161Q8N6U8 529 aaKnown RBP13.03□□□□□ -0.32
LIN54-210ENST00000510877 VN1R2Q8NFZ6 395 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 TAS1R2Q8TE23 839 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 C1QTNF3-AMACRE9PGA6 284 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 ZBED1O96006 694 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 PDGFRAP16234 1089 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 CREB5Q02930 508 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 RAB33AQ14088 237 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 MARCH8Q5T0T0 291 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 NAA35Q5VZE5 725 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 ARMCX6Q7L4S7 300 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 CNPY4Q8N129 248 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 NECAB3Q96P71 396 aaPredicted RBP13.03□□□□□ -0.32
LIN54-210ENST00000510877 DDX23Q9BUQ8 820 aaKnown RBP13.03□□□□□ -0.32
LIN54-210ENST00000510877 BACE2Q9Y5Z0 518 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 SCINQ9Y6U3 715 aa13.03□□□□□ -0.32
LIN54-210ENST00000510877 PFDN6O15212 129 aa13.02□□□□□ -0.32
LIN54-210ENST00000510877 EPHX1P07099 455 aa13.02□□□□□ -0.32
LIN54-210ENST00000510877 CCDC130P13994 396 aa13.02□□□□□ -0.32
LIN54-210ENST00000510877 PRPSAP1Q14558 356 aa13.02□□□□□ -0.32
LIN54-210ENST00000510877 MMS22LQ6ZRQ5 1243 aa13.02□□□□□ -0.32
LIN54-210ENST00000510877 ENDOD1O94919 500 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 TIE1P35590 1138 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 MNX1P50219 401 aaPredicted RBP13.02□□□□□ -0.33
LIN54-210ENST00000510877 SPOPLQ6IQ16 392 aa13.02□□□□□ -0.33
LIN54-210ENST00000510877 RNF135Q8IUD6 432 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms