RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 NELL2Q99435 816 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 MRIQ9BWK5 157 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 ZNF518BQ9C0D4 1074 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 TTYH3Q9C0H2 523 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 POLKQ9UBT6 870 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 NALCNQ8IZF0 1738 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 OVOS2A0A0J9YW53 1432 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 USP6P35125 1406 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 OVOS2Q6IE36 1432 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 SSH2Q76I76 1423 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 ADAMTSL3P82987 1691 aa8.27□□□□□ -1.08
TRAPPC11-206ENST00000509857 TRIM43BA6NCK2 446 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 YY2O15391 372 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 PEX1O43933 1283 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 MGEA5O60502 916 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 XRCC6P12956 609 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 CD6P30203 668 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 PPIFP30405 207 aaKnown RBP8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 SUMO3P55854 103 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 NXPH1P58417 271 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 LMOD3Q0VAK6 560 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 CTBP1Q13363 440 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 RAB32Q13637 225 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 CNGA2Q16280 664 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 TMEM108Q6UXF1 575 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 GAS2L3Q86XJ1 694 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 KRT78Q8N1N4 520 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 TRIM43Q96BQ3 446 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 PGBD1Q96JS3 809 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 MESP1Q9BRJ9 268 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 AMBRA1Q9C0C7 1298 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 BTBD1Q9H0C5 482 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 CPNE7Q9UBL6 633 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 RGS17Q9UGC6 210 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 PTPRUQ92729 1446 aa8.27□□□□□ -1.09
TRAPPC11-206ENST00000509857 WDR27A2RRH5 827 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 MYO1CO00159 1063 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 TBC1D4O60343 1298 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 TNNT2P45379 298 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 RARSP54136 660 aaKnown RBP8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 FSTL1Q12841 308 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 PTPRRQ15256 657 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 PPP4R4Q6NUP7 873 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 MICU3Q86XE3 530 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 SLC15A4Q8N697 577 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 AGAP2Q99490 1192 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 SARGQ9BW04 601 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 ALG13Q9NP73 1137 aaKnown RBP8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 AFF4Q9UHB7 1163 aaKnown RBP8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 SHOC2Q9UQ13 582 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 TTC21BQ7Z4L5 1316 aa8.26□□□□□ -1.09
TRAPPC11-206ENST00000509857 MPPED1O15442 326 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 BRAFP15056 766 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 RPL17P18621 184 aaKnown RBP8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 GNALP38405 381 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 PXNP49023 591 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 HMGA2P52926 109 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 LILRA4P59901 499 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 FMO1Q01740 532 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 ALDH1L2Q3SY69 923 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 SLC44A4Q53GD3 710 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 VPS53Q5VIR6 699 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 SFRP4Q6FHJ7 346 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 B3GALNT2Q8NCR0 500 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 FAM136AQ96C01 138 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 MSLNLQ96KJ4 702 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 PTDSS2Q9BVG9 487 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 SALL3Q9BXA9 1300 aa8.25□□□□□ -1.09
TRAPPC11-206ENST00000509857 TRIM27P14373 513 aa8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 MRPS35P82673 323 aaKnown RBP8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 LAYNQ6UX15 382 aa8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 PDLIM2Q96JY6 352 aa8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 TPSD1Q9BZJ3 242 aa8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 CHMP4BQ9H444 224 aaKnown RBP8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 KIAA1586Q9HCI6 787 aa8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 A1CFQ9NQ94 594 aaKnown RBP8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 FOXJ2Q9P0K8 574 aa8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 KIF16BQ96L93 1317 aa8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 ADGRA2Q96PE1 1338 aa8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 CHD2O14647 1828 aaKnown RBP8.24□□□□□ -1.09
TRAPPC11-206ENST00000509857 MBD3L4A6NDZ8 208 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 MBD3L3A6NE82 208 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 LRPAP1P30533 357 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 ZNF169Q14929 603 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 CCDC181Q5TID7 509 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 TSHZ1Q6ZSZ6 1077 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 TOR1AIP2Q8NFQ8 470 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 OR56A3Q8NH54 315 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 ACTRT2Q8TDY3 377 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 FBXL20Q96IG2 436 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 ACTRT3Q9BYD9 372 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 NUP62CLQ9H1M0 184 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 KLC4Q9NSK0 619 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 OGDHLQ9ULD0 1010 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 PCDHGB6Q9Y5F9 930 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 ACEP12821 1306 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 FMN2Q9NZ56 1722 aa8.23□□□□□ -1.09
TRAPPC11-206ENST00000509857 IPO8O15397 1037 aaKnown RBP8.22□□□□□ -1.09
TRAPPC11-206ENST00000509857 PLIN1O60240 522 aa8.22□□□□□ -1.09
TRAPPC11-206ENST00000509857 TXNRD1Q16881 649 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms