RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 K7EQS6 105 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 COCHO43405 550 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 RHOBTB1O94844 696 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 EPN2O95208 641 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 OLFM2O95897 454 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 CYP17A1P05093 508 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 KCNA4P22459 653 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 PIK3CAP42336 1068 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 SLC6A11P48066 632 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 NDUFA8P51970 172 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 NDST1P52848 882 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 SF3A2Q15428 464 aaKnown RBP16.31■□□□□ 0.2
TPM3-219ENST00000509409 ZACNQ401N2 412 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 SPOPLQ6IQ16 392 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 CCDC33Q8N5R6 958 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 USP33Q8TEY7 942 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 TMEM174Q8WUU8 243 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 PNKPQ96T60 521 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 KRT82Q9NSB4 513 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 COMMD8Q9NX08 183 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 GMIPQ9P107 970 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 EBF1Q9UH73 591 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 MAPK8IP1Q9UQF2 711 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 HPSEQ9Y251 543 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 INVSQ9Y283 1065 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 DENND4CQ5VZ89 1909 aa16.31■□□□□ 0.2
TPM3-219ENST00000509409 E2F8A0AVK6 867 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 TNFRSF10BO14763 440 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 IKBKBO14920 756 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 DCLK1O15075 740 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 ADH1CP00326 375 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 HLA-DRAP01903 254 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 APODP05090 189 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 PRR29P0C7W0 189 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 KRT13P13646 458 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 CCDC130P13994 396 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 GBP1P32455 592 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 VAMP7P51809 220 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 MAP3K7CLP57077 242 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 ELF2Q15723 593 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 PLK5Q496M5 336 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 USP39Q53GS9 565 aaKnown RBP16.3■□□□□ 0.2
TPM3-219ENST00000509409 IL31Q6EBC2 164 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 RHBDF2Q6PJF5 856 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 UNC93AQ86WB7 457 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 FUKQ8N0W3 1084 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 SLC2A14Q8TDB8 520 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 SMOQ99835 787 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 IMPG2Q9BZV3 1241 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 CCSER2Q9H7U1 834 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 MMRN2Q9H8L6 949 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 FAM49BQ9NUQ9 324 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 TRAF3IP3Q9Y228 551 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 ATG2BQ96BY7 2078 aa16.3■□□□□ 0.2
TPM3-219ENST00000509409 CACNA1AO00555 2505 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 ZNF806P0C7X5 589 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 IRF1P10914 325 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 ADH5P11766 374 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 NR2F2P24468 414 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 RPL13P26373 211 aaKnown RBP16.29■□□□□ 0.2
TPM3-219ENST00000509409 ADORA2BP29275 332 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 TIE1P35590 1138 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 MRPS21P82921 87 aaKnown RBP16.29■□□□□ 0.2
TPM3-219ENST00000509409 GAB4Q2WGN9 574 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 BTBD8Q5XKL5 378 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 CRYBG2Q8N1P7 616 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 C12orf29Q8N999 325 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 CCDC150Q8NCX0 1101 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 ZC3H10Q96K80 434 aaKnown RBP16.29■□□□□ 0.2
TPM3-219ENST00000509409 TPSD1Q9BZJ3 242 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 DUSP15Q9H1R2 295 aaPredicted RBP16.29■□□□□ 0.2
TPM3-219ENST00000509409 SMOC1Q9H4F8 434 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 FBXO44Q9H4M3 255 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 IL37Q9NZH6 218 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 ZDHHC9Q9Y397 364 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 PCDHGA5Q9Y5G8 931 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 ATP6V1DQ9Y5K8 247 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 SDK1Q7Z5N4 2213 aa16.29■□□□□ 0.2
TPM3-219ENST00000509409 ANTXRLA6NF34 631 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 BEST1O76090 585 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 ALDH1A2O94788 518 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 RHOBTB3O94955 611 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 KAT7O95251 611 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 ASS1P00966 412 aaKnown RBP16.28■□□□□ 0.2
TPM3-219ENST00000509409 FAM200BP0CF97 657 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 TRIM49P0CI25 452 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 TRIM49CP0CI26 452 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 GCLMP48507 274 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 GAD2Q05329 585 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 KDSRQ06136 332 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 ADAM9Q13443 819 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 PPM1JQ5JR12 505 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 LY6G5CQ5SRR4 150 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 C1orf220Q5T0J3 134 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 SNX30Q5VWJ9 437 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 ANO7Q6IWH7 933 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 INTS8Q75QN2 995 aaKnown RBP16.28■□□□□ 0.2
TPM3-219ENST00000509409 FAM186BQ8IYM0 893 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 NAT16Q8N8M0 369 aa16.28■□□□□ 0.2
TPM3-219ENST00000509409 JAKMIP2Q96AA8 810 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms