RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 GABBR2O75899 941 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 FGFR1OPO95684 399 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 GLULP15104 373 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 HDCP19113 662 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 WEE1P30291 646 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 SOX9P48436 509 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 PGFP49763 221 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 PDE6CP51160 858 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 CSTF1Q05048 431 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 TNK2Q07912 1038 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 ITPRIPL2Q3MIP1 535 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 E4F1Q66K89 784 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 C1orf228Q6PIY5 440 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 GPRIN1Q7Z2K8 1008 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 TMEM150AQ86TG1 271 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 CRYBG2Q8N1P7 616 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 NKD2Q969F2 451 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 MSANTD3Q96H12 275 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 C8orf48Q96LL4 319 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 MYRFLQ96LU7 910 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 CEP295NLQ96MC4 621 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 LRRC3BQ96PB8 259 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 SLITRK1Q96PX8 696 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 CYP2S1Q96SQ9 504 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 TSPY26PQ9H489 355 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 KIF9Q9HAQ2 790 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 LMAN1LQ9HAT1 526 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 RTN4Q9NQC3 1192 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 GKN1Q9NS71 199 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 FAM49BQ9NUQ9 324 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 GTSE1Q9NYZ3 720 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 CNTN6Q9UQ52 1028 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 CCL26Q9Y258 94 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 CACNA1HO95180 2353 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 HELZP42694 1942 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 HHLA1C9JL84 531 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 SPECC1L-ADORA2AF8WAN1 911 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 AP1G2O75843 785 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 YWHAQP27348 245 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 PPP3CCP48454 512 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 IFNAR2P48551 515 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 USP46P62068 366 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 FANCCQ00597 558 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 AMPD2Q01433 879 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 TAF10Q12962 218 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 LRRC32Q14392 662 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 NR1I3Q14994 352 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 SYCP1Q15431 976 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 EXOC3L4Q17RC7 722 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 WDR44Q5JSH3 913 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 PPP1R26Q5T8A7 1209 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 KLHDC7AQ5VTJ3 777 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 ZC3H14Q6PJT7 736 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 TTC30AQ86WT1 665 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 RALGPS2Q86X27 583 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 FAM114A1Q8IWE2 563 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 NUP93Q8N1F7 819 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 PPM1KQ8N3J5 372 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 ARL14EPQ8N8R7 260 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 USP13Q92995 863 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 SMARCD1Q96GM5 515 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 NT5C1BQ96P26 610 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 KCNK16Q96T55 309 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 SMOQ99835 787 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 LSM14BQ9BX40 385 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 TTYH3Q9C0H2 523 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 NACA2Q9H009 215 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 EBF3Q9H4W6 596 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 CYP3A43Q9HB55 503 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 KRT82Q9NSB4 513 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 DLGAP2Q9P1A6 1054 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 APEX2Q9UBZ4 518 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 NUP210Q8TEM1 1887 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 COL4A2P08572 1712 aa9.25□□□□□ -0.93
PDLIM5-213ENST00000509357 KMT2EQ8IZD2 1858 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 C2orf78A6NCI8 922 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 ARNTLO00327 626 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 RTN3O95197 1032 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 SP9P0CG40 484 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 ADORA2BP29275 332 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 CLCN1P35523 988 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 NBL1P41271 181 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 RPS9P46781 194 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 MLLT6P55198 1093 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 JAM2P57087 298 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 GCNT1Q02742 428 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 MTAPQ13126 283 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 RUNX3Q13761 415 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 ZNF268Q14587 947 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 PPP2R5DQ14738 602 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 MTF1Q14872 753 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 PON2Q15165 354 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 PDGFRLQ15198 375 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 PKDCCQ504Y2 493 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 TRIM68Q6AZZ1 485 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 GBP6Q6ZN66 633 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 FAM35AQ86V20 835 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 UNC93AQ86WB7 457 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 SLC2A14Q8TDB8 520 aa9.24□□□□□ -0.93
PDLIM5-213ENST00000509357 SH3RF2Q8TEC5 729 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms