RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 PDGFRLQ15198 375 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 CT47A1Q5JQC4 288 aaPredicted RBP17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 HECTD3Q5T447 861 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 TXNDC11Q6PKC3 985 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 RBM43Q6ZSC3 357 aaKnown RBP17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 RRAGAQ7L523 313 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 GPRIN1Q7Z2K8 1008 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 CREBRFQ8IUR6 639 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 C1orf210Q8IVY1 113 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 OSCP1Q8WVF1 389 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 KAT5Q92993 513 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 PNPLA8Q9NP80 782 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 GMIPQ9P107 970 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 SCML2Q9UQR0 700 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 PIEZO1Q92508 2521 aa17.05■□□□□ 0.32
PDLIM5-212ENST00000509333 OBSL1O75147 1896 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 NUP210Q8TEM1 1887 aaPredicted RBP17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 LEFTY2O00292 366 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 VDRP11473 427 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 ARSAP15289 507 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 CTHP32929 405 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 ANGPT1Q15389 498 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 C1orf228Q6PIY5 440 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 MAMSTRQ6ZN01 415 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 MAML2Q8IZL2 1156 aaPredicted RBP17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 ADGRG2Q8IZP9 1017 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 KIAA1958Q8N8K9 716 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 ATOH1Q92858 354 aaPredicted RBP17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 CHFRQ96EP1 664 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 MSANTD3Q96H12 275 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 PHOX2BQ99453 314 aa17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 DUS2Q9NX74 493 aaKnown RBP17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 NDRG2Q9UN36 371 aaKnown RBP17.04■□□□□ 0.32
PDLIM5-212ENST00000509333 COCHO43405 550 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 TUBP50607 506 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 GCNT1Q02742 428 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 USP4Q13107 963 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 EML3Q32P44 896 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 TTC30AQ86WT1 665 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 ARHGEF19Q8IW93 802 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 PPM1KQ8N3J5 372 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 ZNF276Q8N554 614 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 TFAP2BQ92481 460 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 CNOT6LQ96LI5 555 aaKnown RBP17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 KREMEN1Q96MU8 473 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 ZSWIM1Q9BR11 485 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 THAP9Q9H5L6 903 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 CCSER2Q9H7U1 834 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 ECT2Q9H8V3 914 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 NMUR1Q9HB89 426 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 OSER1Q9NX31 292 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 CNTN6Q9UQ52 1028 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 PCDHB4Q9Y5E5 795 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 CPQQ9Y646 472 aa17.03■□□□□ 0.32
PDLIM5-212ENST00000509333 MYH10P35580 1976 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 TBX18O95935 607 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 PAEPP09466 180 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 MBL2P11226 248 aaPredicted RBP17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 SLC9A1P19634 815 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 MAGEA9P43362 315 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 GALK1P51570 392 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 CNGA2Q16280 664 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 SGO2Q562F6 1265 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 RAB41Q5JT25 222 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 TMEM270Q6UE05 265 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 SCD5Q86SK9 330 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 PIGZQ86VD9 579 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 ZFRQ96KR1 1074 aaKnown RBP17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 CRACR2AQ9BSW2 395 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 INTS2Q9H0H0 1204 aaKnown RBP17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 FBRSL1Q9HCM7 1045 aaKnown RBP17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 UBE2TQ9NPD8 197 aaPredicted RBP17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 TLR8Q9NR97 1041 aaKnown RBP17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 SMPD4Q9NXE4 827 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 WNT6Q9Y6F9 365 aa17.02■□□□□ 0.32
PDLIM5-212ENST00000509333 GOLGA6L22H0YM25 854 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 TULP2O00295 520 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 O00370 1275 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 TRDMT1O14717 391 aaKnown RBP17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 CD19P15391 556 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 GJA4P35212 333 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 ZNF132P52740 706 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 PDE4CQ08493 712 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 GAS6Q14393 721 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 PON2Q15165 354 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 TPD52L1Q16890 204 aaPredicted RBP17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 PKDCCQ504Y2 493 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 PM20D1Q6GTS8 502 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 LCLAT1Q6UWP7 414 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 CCDC186Q7Z3E2 898 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 TTC16Q8NEE8 873 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 UBA3Q8TBC4 463 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 CHRDQ9H2X0 955 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 CYLDQ9NQC7 956 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 FAM86C1Q9NVL1 165 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 SPATA6Q9NWH7 488 aaPredicted RBP17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 CFAP97Q9P2B7 532 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 DACH1Q9UI36 760 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 TSPAN16Q9UKR8 245 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms