RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 HVCN1Q96D96 273 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 CALML4Q96GE6 196 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 ZSCAN31Q96LW9 406 aaPredicted RBP10.04□□□□□ -0.8
NEDD9-211ENST00000508546 RNF38Q9H0F5 515 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 CLMPQ9H6B4 373 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 FSCN3Q9NQT6 498 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 ARHGEF4Q9NR80 690 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 EHD2Q9NZN4 543 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 MAGEC2Q9UBF1 373 aaPredicted RBP10.04□□□□□ -0.8
NEDD9-211ENST00000508546 ITGA11Q9UKX5 1188 aa10.04□□□□□ -0.8
NEDD9-211ENST00000508546 ZNF840PA6NDX5 716 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 TBCAO75347 108 aaKnown RBP10.03□□□□□ -0.8
NEDD9-211ENST00000508546 PPP1R37O75864 691 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 OAS1P00973 400 aaKnown RBP10.03□□□□□ -0.8
NEDD9-211ENST00000508546 KRT18P05783 430 aaKnown RBP10.03□□□□□ -0.8
NEDD9-211ENST00000508546 ADH5P11766 374 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 GABRG2P18507 467 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 WNT7BP56706 349 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 USP46P62068 366 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 NOP14P78316 857 aaKnown RBP10.03□□□□□ -0.8
NEDD9-211ENST00000508546 DHX8Q14562 1220 aaKnown RBP10.03□□□□□ -0.8
NEDD9-211ENST00000508546 MCM6Q14566 821 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 MAPRE1Q15691 268 aaKnown RBP10.03□□□□□ -0.8
NEDD9-211ENST00000508546 SOWAHAQ2M3V2 549 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 PREPLQ4J6C6 727 aaPredicted RBP10.03□□□□□ -0.8
NEDD9-211ENST00000508546 ZNF720Q7Z2F6 126 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 TRMT11Q7Z4G4 463 aaKnown RBP10.03□□□□□ -0.8
NEDD9-211ENST00000508546 LIMS2Q7Z4I7 341 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 GLRX5Q86SX6 157 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 DDX42Q86XP3 938 aaKnown RBP eCLIP10.03□□□□□ -0.8
NEDD9-211ENST00000508546 CSGALNACT2Q8N6G5 542 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 PNPLA1Q8N8W4 532 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 PIP4K2CQ8TBX8 421 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 RAD54LQ92698 747 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 OTUB2Q96DC9 234 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 STRA6Q9BX79 667 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 TEX15Q9BXT5 2789 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 ZHX3Q9H4I2 956 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 TBC1D14Q9P2M4 693 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 DKK4Q9UBT3 224 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 CDH9Q9ULB4 789 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 SNX9Q9Y5X1 595 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 CPQQ9Y646 472 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 MYO9AB2RTY4 2548 aa10.03□□□□□ -0.8
NEDD9-211ENST00000508546 ATMQ13315 3056 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 IGHV1OR15-9A0A0B4J2B8 117 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 E2F8A0AVK6 867 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 TRIM66O15016 1216 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 HCRTO43612 131 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 SH3BP5O60239 455 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 EIF5BO60841 1220 aaKnown RBP10.02□□□□□ -0.81
NEDD9-211ENST00000508546 ATP2C2O75185 946 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 ZNF217O75362 1048 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 LDHAP00338 332 aaKnown RBP10.02□□□□□ -0.81
NEDD9-211ENST00000508546 FTH1P19P0C7X4 201 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 PLCG1P19174 1290 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 BDNFP23560 247 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 ANXA13P27216 316 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 GRIK1P39086 918 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 UBA7P41226 1012 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 ABCG1P45844 678 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 RBP5P82980 135 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 GAD2Q05329 585 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 KDSRQ06136 332 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 SLC41A1Q8IVJ1 513 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 ETFBKMTQ8IXQ9 262 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 ZNF513Q8N8E2 541 aaPredicted RBP10.02□□□□□ -0.81
NEDD9-211ENST00000508546 OR2I1PQ8NGU4 316 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 KBTBD7Q8WVZ9 684 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 MYLPFQ96A32 169 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 CAMK1GQ96NX5 476 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 DUSP9Q99956 384 aaKnown RBP10.02□□□□□ -0.81
NEDD9-211ENST00000508546 SYT15Q9BQS2 421 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 FAM213AQ9BRX8 229 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 IKZF4Q9H2S9 585 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 FAM124BQ9H5Z6 455 aaPredicted RBP10.02□□□□□ -0.81
NEDD9-211ENST00000508546 CRTAC1Q9NQ79 661 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 CALCOCO1Q9P1Z2 691 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 CFAP97Q9P2B7 532 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 SIX4Q9UIU6 781 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 APOBEC2Q9Y235 224 aaKnown RBP10.02□□□□□ -0.81
NEDD9-211ENST00000508546 STARD13Q9Y3M8 1113 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 PCDHB9Q9Y5E1 797 aa10.02□□□□□ -0.81
NEDD9-211ENST00000508546 A0A1W2PQF6 199 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 TBC1D3BA6NDS4 549 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 HOXC11O43248 304 aaPredicted RBP10.01□□□□□ -0.81
NEDD9-211ENST00000508546 GARTP22102 1010 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 LMO2P25791 158 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 NTSR1P30989 418 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 LY6G5CQ5SRR4 150 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 SCARA3Q6AZY7 606 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 NUDT18Q6ZVK8 323 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 NAXDQ8IW45 347 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 SCUBE3Q8IX30 993 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 DEFB119Q8N690 84 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
NEDD9-211ENST00000508546 TERB1Q8NA31 727 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 MYCBPAPQ8TBZ2 947 aa10.01□□□□□ -0.81
NEDD9-211ENST00000508546 LARP4BQ92615 738 aaKnown RBP10.01□□□□□ -0.81
NEDD9-211ENST00000508546 ZNF419Q96HQ0 510 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms