RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 NCKIPSDQ9NZQ3 722 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 RAB26Q9ULW5 256 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 NOD1Q9Y239 953 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 ABCA9Q8IUA7 1624 aa7.56□□□□□ -1.2
UBE2D3-224ENST00000508474 MEI4A8MW99 385 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 FOXN3O00409 490 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 UBDO15205 165 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 TLR2O60603 784 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SNAP91O60641 907 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 PAEPP09466 180 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ETS2P15036 469 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 OSTNP61366 133 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 WASHC5Q12768 1159 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 GRB10Q13322 594 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SLC15A2Q16348 729 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 QRICH1Q2TAL8 776 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 TIMM50Q3ZCQ8 353 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 PDZK1Q5T2W1 519 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 TRIQKQ629K1 86 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 PPP4R4Q6NUP7 873 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SH3RF1Q7Z6J0 888 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM9CQ8IZT9 166 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ADCY4Q8NFM4 1077 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 OSBPL6Q9BZF3 934 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 C6orf62Q9GZU0 229 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 KLHL31Q9H511 634 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 EPB41L4AQ9HCS5 686 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 CACNA2D2Q9NY47 1150 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ARMCX1Q9P291 453 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SLC39A10Q9ULF5 831 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SALL1Q9NSC2 1324 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 GLI2P10070 1586 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 IL12AP29459 219 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 MKRN4PQ13434 485 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 NFYCQ13952 458 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 GJB7Q6PEY0 223 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SPOCD1Q6ZMY3 1216 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 CENPLQ8N0S6 344 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SFRP1Q8N474 314 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 OR7A2PQ8NGA2 310 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SCFD2Q8WU76 684 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ART4Q93070 314 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ZNF669Q96BR6 464 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 OTUD5Q96G74 571 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 BTBD9Q96Q07 612 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 TUBGCP5Q96RT8 1024 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 CDRT15Q96T59 188 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ISCA1Q9BUE6 129 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 PHACTR1Q9C0D0 580 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 FBXO28Q9NVF7 368 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 INTS13Q9NVM9 706 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 BTG4Q9NY30 223 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 AP4B1Q9Y6B7 739 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 C15orf38-AP3S2A0A0A6YYH1 394 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 DNM1LO00429 736 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 TRDMT1O14717 391 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 PEX1O43933 1283 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 MAGEC1O60732 1142 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 POLR2EP19388 210 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 EIF2AK2P19525 551 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 GPD1P21695 349 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ADRA1DP25100 572 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 HNRNPH3P31942 346 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 RAB27AP51159 221 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 HSD17B4P51659 736 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 USP46P62068 366 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 TRIM28Q13263 835 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 DPYSQ14117 519 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 PDK2Q15119 407 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 PDCD4Q53EL6 469 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 DUPD1Q68J44 220 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 DENND1BQ6P3S1 775 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 RINLQ6ZS11 566 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM43BQ6ZT52 329 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ARPINQ7Z6K5 226 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SUN5Q8TC36 379 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 KCTD14Q9BQ13 255 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 DDX50Q9BQ39 737 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 EBF2Q9HAK2 575 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 DNAAF2Q9NVR5 837 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 TMEM161AQ9NX61 479 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 UBA2Q9UBT2 640 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 PRPF19Q9UMS4 504 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ZMYM2Q9UBW7 1377 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 CLTCL1P53675 1640 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 C5orf60A6NFR6 353 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 F5H423 210 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SNPHO15079 494 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 MAGEB2O15479 319 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 EDF1O60869 148 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ABL1P00519 1130 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SHBGP04278 402 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SERPINA6P08185 405 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 RARAP10276 462 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 MUTP22033 750 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ADSSP30520 456 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 EFNA5P52803 228 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ITGA1P56199 1179 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 RPL10AP62906 217 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 IL5RAQ01344 420 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms