RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 SNRPAP09012 282 aaKnown RBP13.4□□□□□ -0.26
SMG7-214ENST00000508461 RARBP10826 455 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 VDRP11473 427 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 AKAP5P24588 427 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 SERPINB6P35237 376 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 LRRC36Q1X8D7 754 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 KDELC2Q7Z4H8 507 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 CPT1BQ92523 772 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 OSBPL1AQ9BXW6 950 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 YIPF3Q9GZM5 350 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 IFT122Q9HBG6 1241 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 NR2E3Q9Y5X4 410 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 SOWAHBA6NEL2 793 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 DYNC1LI2O43237 492 aaPredicted RBP13.4□□□□□ -0.26
SMG7-214ENST00000508461 ZBTB48P10074 688 aaPredicted RBP13.4□□□□□ -0.26
SMG7-214ENST00000508461 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
SMG7-214ENST00000508461 PGM1P36871 562 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 LACTB2Q53H82 288 aaPredicted RBP13.4□□□□□ -0.26
SMG7-214ENST00000508461 CES3Q6UWW8 571 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 OTOAQ7RTW8 1153 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 AGGF1Q8N302 714 aaeCLIP13.4□□□□□ -0.26
SMG7-214ENST00000508461 TWNKQ96RR1 684 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 MECRQ9BV79 373 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 TMEM120AQ9BXJ8 343 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 RNPEPQ9H4A4 650 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 FBXO6Q9NRD1 293 aaPredicted RBP13.4□□□□□ -0.26
SMG7-214ENST00000508461 SCN9AQ15858 1988 aa13.4□□□□□ -0.26
SMG7-214ENST00000508461 B2RBV5 119 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 APOC4-APOC2K7ER74 178 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 GPR25O00155 361 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 ARIH2O95376 493 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 APOC2P02655 101 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 EDN1P05305 212 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 TYK2P29597 1187 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 C1orf127Q8N9H9 656 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 INPP5FQ9Y2H2 1132 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 ALOX15BO15296 676 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 HUS1O60921 280 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 TGFB3P10600 412 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 FAM183BPQ6ZVS7 135 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 OSMRQ99650 979 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 THTPAQ9BU02 230 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 ENTPD5O75356 428 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 UNC5CO95185 931 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 ITGAVP06756 1048 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 IVDP26440 423 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 SULT1E1P49888 294 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 RNASEH2BQ5TBB1 312 aaKnown RBP13.39□□□□□ -0.27
SMG7-214ENST00000508461 EMC10Q5UCC4 262 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 DPY19L2Q6NUT2 758 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 BBS12Q6ZW61 710 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 CDKL3Q8IVW4 592 aaPredicted RBP13.39□□□□□ -0.27
SMG7-214ENST00000508461 WDR75Q8IWA0 830 aaKnown RBP13.39□□□□□ -0.27
SMG7-214ENST00000508461 APOL2Q9BQE5 337 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 MINDY3Q9H8M7 445 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 SETD4Q9NVD3 440 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 ZFATQ9P243 1243 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 MSCO60682 206 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 KRT34O76011 436 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 C1orf146Q5VVC0 180 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 RWDD4Q6NW29 188 aaKnown RBP13.39□□□□□ -0.27
SMG7-214ENST00000508461 RSPH3Q86UC2 560 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 E2F7Q96AV8 911 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 ALKBH8Q96BT7 664 aaKnown RBP13.39□□□□□ -0.27
SMG7-214ENST00000508461 ELOVL4Q9GZR5 314 aa13.39□□□□□ -0.27
SMG7-214ENST00000508461 COL24A1Q17RW2 1714 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 NHSQ6T4R5 1651 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 TMEM63AO94886 807 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 PDK4Q16654 411 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 PREPLQ4J6C6 727 aaPredicted RBP13.38□□□□□ -0.27
SMG7-214ENST00000508461 PAXIP1Q6ZW49 1069 aaPredicted RBP13.38□□□□□ -0.27
SMG7-214ENST00000508461 RPAINQ86UA6 219 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 TRIM42Q8IWZ5 723 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 OLIG1Q8TAK6 271 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 FBXO41Q8TF61 875 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 SLC16A10Q8TF71 515 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 SRPK1Q96SB4 655 aaKnown RBP13.38□□□□□ -0.27
SMG7-214ENST00000508461 SIK2Q9H0K1 926 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 BARX2Q9UMQ3 279 aaPredicted RBP13.38□□□□□ -0.27
SMG7-214ENST00000508461 DRG1Q9Y295 367 aaKnown RBP13.38□□□□□ -0.27
SMG7-214ENST00000508461 CDK5RAP2Q96SN8 1893 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 TCRBV9S1A1TA0A576 114 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 CCDC22O60826 627 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 ADCYAP1R1P41586 468 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 ABCG1P45844 678 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 ZNF268Q14587 947 aaPredicted RBP13.38□□□□□ -0.27
SMG7-214ENST00000508461 MSS51Q4VC12 460 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 BOLA3Q53S33 107 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 CELF3Q5SZQ8 465 aaKnown RBP13.38□□□□□ -0.27
SMG7-214ENST00000508461 LRRC38Q5VT99 294 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 LBX2Q6XYB7 198 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 OR6J1Q8NGC5 347 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 TBC1D10AQ9BXI6 508 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 CPSF3Q9UKF6 684 aaKnown RBP13.38□□□□□ -0.27
SMG7-214ENST00000508461 CNTNAP2Q9UHC6 1331 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 ASB14A6NK59 587 aa13.38□□□□□ -0.27
SMG7-214ENST00000508461 SPECC1L-ADORA2AF8WAN1 911 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms