RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 BBS12Q6ZW61 710 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 ARCQ7LC44 396 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 NLRX1Q86UT6 975 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC26A11Q86WA9 606 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 CPNE8Q86YQ8 564 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 RHPN2Q8IUC4 686 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 CRLF3Q8IUI8 442 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SCUBE1Q8IWY4 988 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 NPAS3Q8IXF0 933 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 DHX37Q8IY37 1157 aaKnown RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 STKLD1Q8NE28 680 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SUPT20HQ8NEM7 779 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC35B2Q8TB61 432 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 DCAKDQ8WVC6 231 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 JADE3Q92613 823 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 GATA6Q92908 595 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 LRRC39Q96DD0 335 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 PWWP2AQ96N64 755 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 CSRNP1Q96S65 589 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 CGRRF1Q99675 332 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 MIPEPQ99797 713 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 GORASP1Q9BQQ3 440 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SYT15Q9BQS2 421 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 FHDC1Q9C0D6 1143 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAF1Q9H063 256 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 ASCC2Q9H1I8 757 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 C1orf21Q9H246 121 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 Q9H521 79 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 PNPLA8Q9NP80 782 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 CYP26B1Q9NR63 512 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMPRSS4Q9NRS4 437 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 ARL8BQ9NVJ2 186 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 BCAP29Q9UHQ4 241 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 XPO7Q9UIA9 1087 aaKnown RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 DCTN4Q9UJW0 460 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 CCPG1Q9ULG6 757 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 CTDP1Q9Y5B0 961 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 COMMD3-BMI1R4GMX3 469 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 BTAF1O14981 1849 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 A0A1W2PPM1 405 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 EME2A4GXA9 379 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM196BA6NMK8 535 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 FOXO6A8MYZ6 492 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 B2RBV5 119 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 APOC4-APOC2K7ER74 178 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 CHADO15335 359 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TBX10O75333 385 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 KRT36O76013 467 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TM7SF2O76062 418 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TOMM70O94826 608 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 PIGRP01833 764 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 APOC2P02655 101 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 C4BPAP04003 597 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 PSAPP07602 524 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 LYNP07948 512 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 SERPINA6P08185 405 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 SNRPAP09012 282 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 DLDP09622 509 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 MYL2P10916 166 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ANPEPP15144 967 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ITGB5P18084 799 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ACO1P21399 889 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 EIF4BP23588 611 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 BRD2P25440 801 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 CNTFP26441 200 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 CRABP2P29373 138 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 SERPINB9P50453 376 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 CDK7P50613 346 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 GPX6P59796 221 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ACTR3P61158 418 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 UBXN2AP68543 259 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 NOP14P78316 857 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 DEUP1Q05D60 604 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 WASHC5Q12768 1159 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 PTK7Q13308 1070 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 LAMB3Q13751 1172 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ITGA9Q13797 1035 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 HNRNPDQ14103 355 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TFDP1Q14186 410 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TFDP2Q14188 446 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 LLGL1Q15334 1064 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 KCTD19Q17RG1 926 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC5A9Q2M3M2 681 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 BBS9Q3SYG4 887 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 HSP90AA5PQ58FG0 334 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM47CQ5HY64 1035 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 STXBP5Q5T5C0 1151 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ANGEL2Q5VTE6 544 aaKnown RBP5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 C1orf146Q5VVC0 180 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 RFWD3Q6PCD5 774 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMEM270Q6UE05 265 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 MFSD7Q6UXD7 560 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 DSTYKQ6XUX3 929 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 CAPN12Q6ZSI9 719 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ACAD11Q709F0 780 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ARHGAP22Q7Z5H3 698 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 LRRC6Q86X45 466 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 ANKMY2Q8IV38 441 aa5.17□□□□□ -1.58
HMGB3P16-201ENST00000508037 WDR75Q8IWA0 830 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms