RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SOWAHAQ2M3V2 549 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 IGDCC3Q8IVU1 814 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 ABHD16BQ9H3Z7 469 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 ASNSD1Q9NWL6 643 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 GEMIN8Q9NWZ8 242 aaKnown RBP15.15■□□□□ 0.02
DDX41-208ENST00000507955 MCM8Q9UJA3 840 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 CLUHO75153 1309 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 LOC102724159A0A0B4J2E5 919 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 PAPSS1O43252 624 aaPredicted RBP15.15■□□□□ 0.02
DDX41-208ENST00000507955 TREHO43280 583 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 ATP6V1G2O95670 118 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 FGFR1P11362 822 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 CYP2C9P11712 490 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 IL4RP24394 825 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 RABGGTBP53611 331 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 DPYSL3Q14195 570 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 STAT4Q14765 748 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 PWP2Q15269 919 aaKnown RBP15.15■□□□□ 0.02
DDX41-208ENST00000507955 HIF1AQ16665 826 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 BBS9Q3SYG4 887 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 PPP6R3Q5H9R7 873 aaPredicted RBP15.15■□□□□ 0.02
DDX41-208ENST00000507955 OLFML2BQ68BL8 750 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 PLEKHH3Q7Z736 793 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 FAM172AQ8WUF8 416 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 MYCBPQ99417 103 aaPredicted RBP15.15■□□□□ 0.02
DDX41-208ENST00000507955 TRIM6Q9C030 488 aaPredicted RBP15.15■□□□□ 0.02
DDX41-208ENST00000507955 GBA2Q9HCG7 927 aaPredicted RBP15.15■□□□□ 0.02
DDX41-208ENST00000507955 SLC5A4Q9NY91 659 aa15.15■□□□□ 0.02
DDX41-208ENST00000507955 RDXP35241 583 aaKnown RBP15.14■□□□□ 0.01
DDX41-208ENST00000507955 DARS2Q6PI48 645 aaKnown RBP15.14■□□□□ 0.01
DDX41-208ENST00000507955 FAM47EQ6ZV65 393 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 TBC1D1Q86TI0 1168 aaPredicted RBP15.14■□□□□ 0.01
DDX41-208ENST00000507955 RELL1Q8IUW5 271 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 CCDC63Q8NA47 563 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 KLF6Q99612 283 aaPredicted RBP15.14■□□□□ 0.01
DDX41-208ENST00000507955 MAK16Q9BXY0 300 aaKnown RBP15.14■□□□□ 0.01
DDX41-208ENST00000507955 MORF4L1Q9UBU8 362 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 PIN4Q9Y237 131 aaKnown RBP15.14■□□□□ 0.01
DDX41-208ENST00000507955 A8MXQ7 604 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 ALOX15BO15296 676 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 PRPSAP2O60256 369 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 TCEA3O75764 348 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 GSTA1P08263 222 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 LCP1P13796 627 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 KRT15P19012 456 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 FOXN2P32314 431 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 WDR4P57081 412 aaKnown RBP15.14■□□□□ 0.01
DDX41-208ENST00000507955 KCNJ2P63252 427 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 TAZQ16635 292 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 CGB2Q6NT52 195 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 SLC27A1Q6PCB7 646 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 OLFML1Q6UWY5 402 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 CENPUQ71F23 418 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 NAT8LQ8N9F0 302 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 FBXO36Q8NEA4 188 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 SNX27Q96L92 541 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 CCDC77Q9BR77 488 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 CNPY3Q9BT09 278 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 XPO7Q9UIA9 1087 aaKnown RBP15.14■□□□□ 0.01
DDX41-208ENST00000507955 COL1A2P08123 1366 aa15.14■□□□□ 0.01
DDX41-208ENST00000507955 GOLGA8RI6L899 631 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 APOC4-APOC2K7ER74 178 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 CELF2O95319 508 aaKnown RBP15.13■□□□□ 0.01
DDX41-208ENST00000507955 APOC2P02655 101 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 STX2P32856 288 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 NCALDP61601 193 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 SOX4Q06945 474 aaPredicted RBP15.13■□□□□ 0.01
DDX41-208ENST00000507955 C3orf62Q6ZUJ4 267 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 CCHCR1Q8TD31 782 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 PYROXD1Q8WU10 500 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 TGS1Q96RS0 853 aaKnown RBP15.13■□□□□ 0.01
DDX41-208ENST00000507955 GCOM2Q9BZD3 368 aaPredicted RBP15.13■□□□□ 0.01
DDX41-208ENST00000507955 NOD2Q9HC29 1040 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 UBN1Q9NPG3 1134 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 LGALS13Q9UHV8 139 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 GRID1Q9ULK0 1009 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 CHMP2BQ9UQN3 213 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.13■□□□□ 0.01
DDX41-208ENST00000507955 USP15Q9Y4E8 981 aaPredicted RBP15.13■□□□□ 0.01
DDX41-208ENST00000507955 F5H423 210 aaPredicted RBP15.13■□□□□ 0.01
DDX41-208ENST00000507955 H7C0C1 242 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 ATP5OP48047 213 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 KRT81Q14533 505 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 TRABD2AQ86V40 505 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 PPIL6Q8IXY8 311 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 SLC35F5Q8WV83 523 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 BAIAP2L1Q9UHR4 511 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 MCF2LO15068 1137 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 RPA3P35244 121 aaPredicted RBP15.13■□□□□ 0.01
DDX41-208ENST00000507955 ZBTB6Q15916 424 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 GALNTL6Q49A17 601 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 PKDCCQ504Y2 493 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 C9orf57Q5W0N0 161 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 ZNF410Q86VK4 478 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 ARRDC4Q8NCT1 418 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 CKAP2Q8WWK9 683 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 TBC1D31Q96DN5 1066 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 TRIM56Q9BRZ2 755 aaKnown RBP15.13■□□□□ 0.01
DDX41-208ENST00000507955 NSRP1Q9H0G5 558 aaKnown RBP15.13■□□□□ 0.01
DDX41-208ENST00000507955 SHOC2Q9UQ13 582 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms