RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CBX2Q14781 532 aaPredicted RBP21.12■□□□□ 0.97
USP53-203ENST00000507597 CLUL1Q15846 466 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 CLEC16AQ2KHT3 1053 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 NAA35Q5VZE5 725 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 HGSNATQ68CP4 663 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 TOGARAM2Q6ZUX3 1019 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 CCDC186Q7Z3E2 898 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 ZNF571Q7Z3V5 609 aaPredicted RBP21.12■□□□□ 0.97
USP53-203ENST00000507597 TMTC1Q8IUR5 882 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 TC2NQ8N9U0 490 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 ACSF2Q96CM8 615 aaPredicted RBP21.12■□□□□ 0.97
USP53-203ENST00000507597 TRIM11Q96F44 468 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 TMEM30AQ9NV96 361 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 MBTPS2O43462 519 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 AKR1B10O60218 316 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 IPO7O95373 1038 aaKnown RBP21.11■□□□□ 0.97
USP53-203ENST00000507597 RALAP11233 206 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 CHRNB2P17787 502 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 CENPCQ03188 943 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 ADIGQ0VDE8 80 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 MTMR3Q13615 1198 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 EFHC1Q5JVL4 640 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 PM20D1Q6GTS8 502 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 ACAD10Q6JQN1 1059 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 GPIHBP1Q8IV16 184 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 SCAMP5Q8TAC9 235 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 VCPIP1Q96JH7 1222 aa21.11■□□□□ 0.97
USP53-203ENST00000507597 LUC7LQ9NQ29 371 aaKnown RBP21.11■□□□□ 0.97
USP53-203ENST00000507597 USP15Q9Y4E8 981 aaPredicted RBP21.11■□□□□ 0.97
USP53-203ENST00000507597 PTPRDP23468 1912 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 TULP2O00295 520 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 RTN2O75298 545 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 GLI1P08151 1106 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 CFHP08603 1231 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 UNGP13051 313 aaPredicted RBP21.1■□□□□ 0.97
USP53-203ENST00000507597 CYLC1P35663 651 aaPredicted RBP21.1■□□□□ 0.97
USP53-203ENST00000507597 OTOP3Q7RTS5 596 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 TMC8Q8IU68 726 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 CCDC170Q8IYT3 715 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 HS6ST3Q8IZP7 471 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 WDTC1Q8N5D0 677 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 CPA5Q8WXQ8 436 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 SUSD6Q92537 303 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 ULBP1Q9BZM6 244 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 NHEJ1Q9H9Q4 299 aaPredicted RBP21.1■□□□□ 0.97
USP53-203ENST00000507597 HCFC1R1Q9NWW0 138 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 GDE1Q9NZC3 331 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 ADAM22Q9P0K1 906 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 ADAMTS1Q9UHI8 967 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 NR2E1Q9Y466 385 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 MYH10P35580 1976 aa21.1■□□□□ 0.97
USP53-203ENST00000507597 E5RJQ4 531 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 ABL1P00519 1130 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 F11P03951 625 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 USP17L7P0C7H9 530 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 EIF4A3P38919 411 aaKnown RBP21.09■□□□□ 0.97
USP53-203ENST00000507597 GABRB2P47870 512 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 MRPS5P82675 430 aaKnown RBP21.09■□□□□ 0.97
USP53-203ENST00000507597 C1QBPQ07021 282 aaKnown RBP21.09■□□□□ 0.97
USP53-203ENST00000507597 ZNF268Q14587 947 aaPredicted RBP21.09■□□□□ 0.97
USP53-203ENST00000507597 SNX30Q5VWJ9 437 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 BTBD8Q5XKL5 378 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 E4F1Q66K89 784 aaPredicted RBP21.09■□□□□ 0.97
USP53-203ENST00000507597 OR6B2Q6IFH4 312 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 PTCRAQ6ISU1 281 aaPredicted RBP21.09■□□□□ 0.97
USP53-203ENST00000507597 PHF13Q86YI8 300 aaPredicted RBP21.09■□□□□ 0.97
USP53-203ENST00000507597 CCDC112Q8NEF3 446 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 ATXN2LQ8WWM7 1075 aaKnown RBP21.09■□□□□ 0.97
USP53-203ENST00000507597 SYT11Q9BT88 431 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 LRRC3Q9BY71 257 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 SLITRK6Q9H5Y7 841 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 ABCC13Q9NSE7 274 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 OLA1Q9NTK5 396 aaKnown RBP21.09■□□□□ 0.97
USP53-203ENST00000507597 TMEM51Q9NW97 253 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 CLIC5Q9NZA1 410 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 ARHGAP20Q9P2F6 1191 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 USTQ9Y2C2 406 aa21.09■□□□□ 0.97
USP53-203ENST00000507597 A0A1W2PRU2 124 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 MYBL1P10243 752 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 DESP17661 470 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 MMP8P22894 467 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 SCNN1AP37088 669 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 TUBP50607 506 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 DAOAP59103 153 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 USP46P62068 366 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 SLC18A3Q16572 532 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 C10orf76Q5T2E6 689 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 HECTD3Q5T447 861 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 WDR59Q6PJI9 974 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 GPRIN1Q7Z2K8 1008 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 SCUBE3Q8IX30 993 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 PLCD3Q8N3E9 789 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 ZNF276Q8N554 614 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 CPXM1Q96SM3 734 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 BAG1Q99933 345 aaPredicted RBP21.08■□□□□ 0.97
USP53-203ENST00000507597 PHF7Q9BWX1 381 aaPredicted RBP21.08■□□□□ 0.97
USP53-203ENST00000507597 NACA2Q9H009 215 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 TASP1Q9H6P5 420 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 ZNF334Q9HCZ1 680 aaPredicted RBP21.08■□□□□ 0.97
USP53-203ENST00000507597 ASNSD1Q9NWL6 643 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms