RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 DAOAP59103 153 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 PPM1LQ5SGD2 360 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 OR6B2Q6IFH4 312 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 OLFML1Q6UWY5 402 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 BHLHA9Q7RTU4 235 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 SCUBE3Q8IX30 993 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 SIX6OS1Q8N1H7 587 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 HDAC7Q8WUI4 952 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 PPP2R3CQ969Q6 453 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 MCRS1Q96EZ8 462 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 CEP295NLQ96MC4 621 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 LACRTQ9GZZ8 138 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 MYO1AQ9UBC5 1043 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 CNOT8Q9UFF9 292 aaKnown RBP14.92□□□□□ -0.02
RNF4-208ENST00000507247 INTUQ9ULD6 942 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 PPP2R2CQ9Y2T4 447 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 NOTCH4Q99466 2003 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 FAM92AA1XBS5 289 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 GOLGA8SH3BPF8 625 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 CCL16O15467 120 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 PJA2O43164 708 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 RTN3O95197 1032 aaPredicted RBP14.91□□□□□ -0.02
RNF4-208ENST00000507247 ZBED1O96006 694 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 ABL1P00519 1130 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 LRG1P02750 347 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 CYP1A2P05177 515 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 CCDC175P0C221 793 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 CSH1P0DML2 217 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 CSH2P0DML3 217 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 MYBL1P10243 752 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 EPHB3P54753 998 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 GPC5P78333 572 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 MRPS5P82675 430 aaKnown RBP14.91□□□□□ -0.02
RNF4-208ENST00000507247 PLD1Q13393 1074 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 ZNF268Q14587 947 aaPredicted RBP14.91□□□□□ -0.02
RNF4-208ENST00000507247 PM20D1Q6GTS8 502 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 PLEKHA7Q6IQ23 1121 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 HFE2Q6ZVN8 426 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 KIAA1328Q86T90 577 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 SCML4Q8N228 414 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 C3orf20Q8ND61 904 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 MYLIPQ8WY64 445 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 CTNNBL1Q8WYA6 563 aaPredicted RBP14.91□□□□□ -0.02
RNF4-208ENST00000507247 PSMG2Q969U7 264 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 TRIM44Q96DX7 344 aaPredicted RBP14.91□□□□□ -0.02
RNF4-208ENST00000507247 TRIM11Q96F44 468 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 TTLL2Q9BWV7 592 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 AVENQ9NQS1 362 aaPredicted RBP14.91□□□□□ -0.02
RNF4-208ENST00000507247 CNGB3Q9NQW8 809 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.91□□□□□ -0.02
RNF4-208ENST00000507247 STRIP2Q9ULQ0 834 aa14.91□□□□□ -0.02
RNF4-208ENST00000507247 MAGED2Q9UNF1 606 aaPredicted RBP14.91□□□□□ -0.02
RNF4-208ENST00000507247 FBXO21O94952 628 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 IGFBP4P22692 258 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 YWHAQP27348 245 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 HOXA9P31269 272 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 ARHGAP25P42331 645 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 PGFP49763 221 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 SNX16P57768 344 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 SLC6A3Q01959 620 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 MAMLD1Q13495 774 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 VEPH1Q14D04 833 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 TAF5Q15542 800 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 FAM102AQ5T9C2 384 aaPredicted RBP14.9□□□□□ -0.02
RNF4-208ENST00000507247 RTL10Q7L3V2 364 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 DNAJB7Q7Z6W7 309 aaPredicted RBP14.9□□□□□ -0.02
RNF4-208ENST00000507247 EFHBQ8N7U6 833 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 KHSRPQ92945 711 aaKnown RBP eCLIP14.9□□□□□ -0.02
RNF4-208ENST00000507247 FBXO32Q969P5 355 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 FBXO44Q9H4M3 255 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 ZNF334Q9HCZ1 680 aaPredicted RBP14.9□□□□□ -0.02
RNF4-208ENST00000507247 LUC7LQ9NQ29 371 aaKnown RBP14.9□□□□□ -0.02
RNF4-208ENST00000507247 METTL5Q9NRN9 209 aaKnown RBP14.9□□□□□ -0.02
RNF4-208ENST00000507247 COMMD8Q9NX08 183 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 WDR35Q9P2L0 1181 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 TRIM10Q9UDY6 481 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 SALL4Q9UJQ4 1053 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 SCML2Q9UQR0 700 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 DUSP10Q9Y6W6 482 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 EYSQ5T1H1 3165 aa14.9□□□□□ -0.02
RNF4-208ENST00000507247 USP27XA6NNY8 438 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 YJEFN3A6XGL0 299 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 E7ENQ6 273 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 GRAP2O75791 330 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 SCNN1AP37088 669 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 TAF10Q12962 218 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 PPP1R15BQ5SWA1 713 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 TRNP1Q6NT89 227 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 DNAJC24Q6P3W2 148 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 TMEM184AQ6ZMB5 413 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 SLC26A9Q7LBE3 791 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 SCD5Q86SK9 330 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 TMC8Q8IU68 726 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 ZDHHC17Q8IUH5 632 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 REXO1L1PQ8IX06 675 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 HS6ST3Q8IZP7 471 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 C12orf76Q8N812 135 aaPredicted RBP14.89□□□□□ -0.03
RNF4-208ENST00000507247 JOSD2Q8TAC2 188 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 RFFLQ8WZ73 363 aa14.89□□□□□ -0.03
RNF4-208ENST00000507247 CASP10Q92851 521 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms