RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 KLHL30Q0D2K2 578 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 TAF10Q12962 218 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 PDCLQ13371 301 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 SNX30Q5VWJ9 437 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 WDR59Q6PJI9 974 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 TRIM72Q6ZMU5 477 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 CCDC186Q7Z3E2 898 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 ZNF571Q7Z3V5 609 aaPredicted RBP13.53□□□□□ -0.24
TCOF1-210ENST00000506767 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.53□□□□□ -0.24
TCOF1-210ENST00000506767 TMEM35BQ8NCS4 154 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 C1orf131Q8NDD1 294 aaKnown RBP13.53□□□□□ -0.24
TCOF1-210ENST00000506767 ASB2Q96Q27 587 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 PHF7Q9BWX1 381 aaPredicted RBP13.53□□□□□ -0.24
TCOF1-210ENST00000506767 PDCL3Q9H2J4 239 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 LRRC4Q9HBW1 653 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 ABHD10Q9NUJ1 306 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 FAM50BQ9Y247 325 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 MRPS23Q9Y3D9 190 aaKnown RBP13.53□□□□□ -0.24
TCOF1-210ENST00000506767 BZW2Q9Y6E2 419 aaKnown RBP13.53□□□□□ -0.24
TCOF1-210ENST00000506767 XIRP2A4UGR9 3374 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 ANAPC1Q9H1A4 1944 aa13.52□□□□□ -0.24
TCOF1-210ENST00000506767 A0A1W2PRU2 124 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 SOBPA7XYQ1 873 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 AKR1B15C9JRZ8 316 aaPredicted RBP13.52□□□□□ -0.25
TCOF1-210ENST00000506767 SERPING1P05155 500 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 GJA1P17302 382 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 GOLGA8FQ08AF8 430 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 GOLGA8DPQ0D2H9 430 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 ADIGQ0VDE8 80 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 IFRD2Q12894 506 aaPredicted RBP13.52□□□□□ -0.25
TCOF1-210ENST00000506767 TEAD2Q15562 447 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 BHLHA9Q7RTU4 235 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 CNGA4Q8IV77 575 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 TC2NQ8N9U0 490 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 PDZD8Q8NEN9 1154 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 SLC30A5Q8TAD4 765 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 FBXO32Q969P5 355 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 PPP1R13BQ96KQ4 1090 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 SLITRK1Q96PX8 696 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 CPXM1Q96SM3 734 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 ULBP1Q9BZM6 244 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 ATXN3LQ9H3M9 355 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 CNGB3Q9NQW8 809 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.52□□□□□ -0.25
TCOF1-210ENST00000506767 CHORDC1Q9UHD1 332 aaPredicted RBP13.52□□□□□ -0.25
TCOF1-210ENST00000506767 USTQ9Y2C2 406 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 CEP83Q9Y592 693 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 MYO16Q9Y6X6 1858 aa13.52□□□□□ -0.25
TCOF1-210ENST00000506767 TCF20Q9UGU0 1960 aaKnown RBP13.51□□□□□ -0.25
TCOF1-210ENST00000506767 ZNF840PA6NDX5 716 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 E5RJQ4 531 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 ZBED1O96006 694 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 USP17L7P0C7H9 530 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 BMP1P13497 986 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 LCP1P13796 627 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 CEBPBP17676 345 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 TNFAIP3P21580 790 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 GABRB2P47870 512 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 PGFP49763 221 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 DAOAP59103 153 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 CYP4F8P98187 520 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 CENPCQ03188 943 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 CLEC16AQ2KHT3 1053 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 PTPN20Q4JDL3 420 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 SCD5Q86SK9 330 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 MON1AQ86VX9 555 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 NPAS3Q8IXF0 933 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 FGF13Q92913 245 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 NOX5Q96PH1 765 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 MYADMQ96S97 322 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 TRPM5Q9NZQ8 1165 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 GMIPQ9P107 970 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 ARHGAP20Q9P2F6 1191 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 IMPACTQ9P2X3 320 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 TJP2Q9UDY2 1190 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 CDH7Q9ULB5 785 aa13.51□□□□□ -0.25
TCOF1-210ENST00000506767 ZFP37Q9Y6Q3 630 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-210ENST00000506767 PIK3R2O00459 728 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 DDX3XO00571 662 aaKnown RBP eCLIP13.5□□□□□ -0.25
TCOF1-210ENST00000506767 PAPSS1O43252 624 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-210ENST00000506767 FBXO21O94952 628 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 ERBB2P04626 1255 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 PLEKP08567 350 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-210ENST00000506767 PFKLP17858 780 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 DDX6P26196 483 aaKnown RBP eCLIP13.5□□□□□ -0.25
TCOF1-210ENST00000506767 WEE1P30291 646 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 PSEN1P49768 467 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 MRE11P49959 708 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 CDK17Q00537 523 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 GSE1Q14687 1217 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 STXBP5Q5T5C0 1151 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 NAA35Q5VZE5 725 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 GET4Q7L5D6 327 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-210ENST00000506767 OTOP3Q7RTS5 596 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 SCUBE3Q8IX30 993 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 SIX6OS1Q8N1H7 587 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 ZNF276Q8N554 614 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 ADAMTS19Q8TE59 1207 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 CLEC4CQ8WTT0 213 aa13.5□□□□□ -0.25
TCOF1-210ENST00000506767 CPA5Q8WXQ8 436 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms