RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 PNPLA8Q9NP80 782 aa16.45■□□□□ 0.22
DDR1-258ENST00000506573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDR1-258ENST00000506573 FAM49BQ9NUQ9 324 aa16.45■□□□□ 0.22
DDR1-258ENST00000506573 RAB20Q9NX57 234 aa16.45■□□□□ 0.22
DDR1-258ENST00000506573 SMPD4Q9NXE4 827 aa16.45■□□□□ 0.22
DDR1-258ENST00000506573 CHORDC1Q9UHD1 332 aaPredicted RBP16.45■□□□□ 0.22
DDR1-258ENST00000506573 SH3BP1Q9Y3L3 701 aa16.45■□□□□ 0.22
DDR1-258ENST00000506573 PCDHA5Q9Y5H7 936 aa16.45■□□□□ 0.22
DDR1-258ENST00000506573 ZNF638Q14966 1978 aaKnown RBP16.44■□□□□ 0.22
DDR1-258ENST00000506573 OLFM2O95897 454 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 TDGF1P13385 188 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 SDHBP21912 280 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 CETN1Q12798 172 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 GAS6Q14393 721 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 LAIR1Q6GTX8 287 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 FSTL4Q6MZW2 842 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 PRR23BQ6ZRT6 265 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 NUDT18Q6ZVK8 323 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 CEP68Q76N32 757 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 KIAA2013Q8IYS2 634 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 SCAMP5Q8TAC9 235 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 DHTKD1Q96HY7 919 aaPredicted RBP16.44■□□□□ 0.22
DDR1-258ENST00000506573 RNF38Q9H0F5 515 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 METTL14Q9HCE5 456 aaKnown RBP16.44■□□□□ 0.22
DDR1-258ENST00000506573 IL37Q9NZH6 218 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 CFAP97Q9P2B7 532 aa16.44■□□□□ 0.22
DDR1-258ENST00000506573 ARMCX3Q9UH62 379 aaPredicted RBP16.44■□□□□ 0.22
DDR1-258ENST00000506573 DENND4CQ5VZ89 1909 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 GVINP1Q7Z2Y8 2422 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 CCDC163A0A0D9SF12 145 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 E2F8A0AVK6 867 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 OTOL1A6NHN0 477 aaPredicted RBP16.43■□□□□ 0.22
DDR1-258ENST00000506573 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.43■□□□□ 0.22
DDR1-258ENST00000506573 CHURC1-FNTBB4DL54 471 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 TNFRSF10BO14763 440 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 RNF40O75150 1001 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 CILPO75339 1184 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 ID4P47928 161 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 FOXK2Q01167 660 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 ORC1Q13415 861 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 SIM2Q14190 667 aaPredicted RBP16.43■□□□□ 0.22
DDR1-258ENST00000506573 BTBD8Q5XKL5 378 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 HEATR6Q6AI08 1181 aaKnown RBP16.43■□□□□ 0.22
DDR1-258ENST00000506573 PAQR9Q6ZVX9 377 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 FILIP1Q7Z7B0 1213 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 CAMKK1Q8N5S9 505 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 C12orf29Q8N999 325 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 SPATA20Q8TB22 786 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 RIN3Q8TB24 985 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 ELMO3Q96BJ8 720 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 HEXIM2Q96MH2 286 aaKnown RBP16.43■□□□□ 0.22
DDR1-258ENST00000506573 CDK5RAP1Q96SZ6 601 aaKnown RBP16.43■□□□□ 0.22
DDR1-258ENST00000506573 SMOQ99835 787 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 LINC00597Q9H2U6 94 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 TMEM30AQ9NV96 361 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 HMGXB4Q9UGU5 601 aa16.43■□□□□ 0.22
DDR1-258ENST00000506573 CIZ1Q9ULV3 898 aaPredicted RBP16.43■□□□□ 0.22
DDR1-258ENST00000506573 BICDL2A1A5D9 508 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 FAM92AA1XBS5 289 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 COCHO43405 550 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 EGFP01133 1207 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 FNTBP49356 437 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 PSEN1P49768 467 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 MCCD1P59942 119 aaPredicted RBP16.42■□□□□ 0.22
DDR1-258ENST00000506573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.42■□□□□ 0.22
DDR1-258ENST00000506573 WDR5BQ86VZ2 330 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 ADGRG2Q8IZP9 1017 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 CHFRQ96EP1 664 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 EEF2KMTQ96G04 330 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 CEP63Q96MT8 703 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 APOBEC3GQ9HC16 384 aaKnown RBP16.42■□□□□ 0.22
DDR1-258ENST00000506573 GMIPQ9P107 970 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 LSM7Q9UK45 103 aaKnown RBP16.42■□□□□ 0.22
DDR1-258ENST00000506573 SCML2Q9UQR0 700 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 EP300Q09472 2414 aaPredicted RBP16.42■□□□□ 0.22
DDR1-258ENST00000506573 OBSL1O75147 1896 aa16.42■□□□□ 0.22
DDR1-258ENST00000506573 K7ESF4 209 aa16.41■□□□□ 0.22
DDR1-258ENST00000506573 FOXD2O60548 495 aaPredicted RBP16.41■□□□□ 0.22
DDR1-258ENST00000506573 TLR5O60602 858 aa16.41■□□□□ 0.22
DDR1-258ENST00000506573 ACO1P21399 889 aaKnown RBP16.41■□□□□ 0.22
DDR1-258ENST00000506573 ATP5C1P36542 298 aaKnown RBP16.41■□□□□ 0.22
DDR1-258ENST00000506573 EIF2DP41214 584 aaKnown RBP16.41■□□□□ 0.22
DDR1-258ENST00000506573 CCDC40Q4G0X9 1142 aa16.41■□□□□ 0.22
DDR1-258ENST00000506573 ANKRD40Q6AI12 368 aa16.41■□□□□ 0.22
DDR1-258ENST00000506573 RPLP0P6Q8NHW5 317 aa16.41■□□□□ 0.22
DDR1-258ENST00000506573 TMEM176AQ96HP8 235 aa16.41■□□□□ 0.22
DDR1-258ENST00000506573 DUSP16Q9BY84 665 aa16.41■□□□□ 0.22
DDR1-258ENST00000506573 CISHQ9NSE2 258 aa16.41■□□□□ 0.22
DDR1-258ENST00000506573 PTPRDP23468 1912 aa16.41■□□□□ 0.22
DDR1-258ENST00000506573 PRR5-ARHGAP8B1AHC4 643 aa16.4■□□□□ 0.22
DDR1-258ENST00000506573 LRP3O75074 770 aa16.4■□□□□ 0.22
DDR1-258ENST00000506573 FGFR1OPO95684 399 aaKnown RBP16.4■□□□□ 0.22
DDR1-258ENST00000506573 APODP05090 189 aa16.4■□□□□ 0.22
DDR1-258ENST00000506573 RETP07949 1114 aa16.4■□□□□ 0.22
DDR1-258ENST00000506573 ZDHHC11BP0C7U3 371 aa16.4■□□□□ 0.22
DDR1-258ENST00000506573 CCDC192P0DO97 292 aa16.4■□□□□ 0.22
DDR1-258ENST00000506573 RALAP11233 206 aa16.4■□□□□ 0.22
DDR1-258ENST00000506573 ADH5P11766 374 aa16.4■□□□□ 0.22
DDR1-258ENST00000506573 TBXAS1P24557 533 aaPredicted RBP16.4■□□□□ 0.22
DDR1-258ENST00000506573 ARHGAP8P85298 464 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms