RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ACTR2P61160 394 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 TLE2Q04725 743 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SCAPQ12770 1279 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 FOXD4Q12950 439 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 CUL4BQ13620 913 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 PTCHD3Q3KNS1 767 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 FAM102AQ5T9C2 384 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 METRNLQ641Q3 311 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SFRP4Q6FHJ7 346 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 FAAH2Q6GMR7 532 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 RINT1Q6NUQ1 792 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 RINLQ6ZS11 566 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 CLNKQ7Z7G1 428 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SGMS1Q86VZ5 419 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 HERC6Q8IVU3 1022 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SP8Q8IXZ3 490 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SLC15A3Q8IY34 581 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ESX1Q8N693 406 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 OR56A1Q8NGH5 318 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 OR1N1Q8NGS0 311 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SCAMP5Q8TAC9 235 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 DNAJB14Q8TBM8 379 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZNF483Q8TF39 744 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ASB12Q8WXK4 309 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 THAP4Q8WY91 577 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 RILPL2Q969X0 211 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZDHHC12Q96GR4 267 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 MAELQ96JY0 434 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 TRAPPC9Q96Q05 1148 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 DCLRE1CQ96SD1 692 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 KRTAP9-8Q9BYQ0 159 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 MEGF9Q9H1U4 602 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SMOC2Q9H3U7 446 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 CXorf36Q9H7Y0 433 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 VPS45Q9NRW7 570 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 GGA3Q9NZ52 723 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 VSX1Q9NZR4 365 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 RNF181Q9P0P0 153 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 HSFX1Q9UBD0 423 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 LPAR3Q9UBY5 353 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 FEM1BQ9UK73 627 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 NDRG4Q9ULP0 352 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZFR2Q9UPR6 939 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 MRPS17Q9Y2R5 130 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 USP15Q9Y4E8 981 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SLC30A1Q9Y6M5 507 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ABCA9Q8IUA7 1624 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 RAPGEF6Q8TEU7 1601 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 CDK13Q14004 1512 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ARHGEF40Q8TER5 1519 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 YEATS2Q9ULM3 1422 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZNF536O15090 1300 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SPATA31A3Q5VYP0 1347 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 TTC37Q6PGP7 1564 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 ADAMTS20P59510 1910 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 AATKQ6ZMQ8 1374 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 PNMA6EA0A0J9YXQ4 647 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 EFCAB8A8MWE9 144 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 CAPN14A8MX76 684 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 F5H697 171 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 J3KTA2 159 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 LEFTY2O00292 366 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 PCDH17O14917 1159 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 CYP27B1O15528 508 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZSCAN9O15535 394 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 HOXC11O43248 304 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 TRIAP1O43715 76 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 MBD4O95243 580 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 PRKCBP05771 671 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 HSP90AA1P07900 732 aaKnown RBP3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 ARP10275 920 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 FGFR4P22455 802 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 PPIFP30405 207 aaKnown RBP3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 KRT9P35527 623 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 NDUFV1P49821 464 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 HSPA2P54652 639 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 RNASE9P60153 205 aaKnown RBP3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 KRTAP10-2P60368 255 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 HSD11B2P80365 405 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 MPP1Q00013 466 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 FPGSQ05932 587 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 TRPC3Q13507 836 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 DYRK1AQ13627 763 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 CCNIQ14094 377 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 PREPLQ4J6C6 727 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 CERCAMQ5T4B2 595 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 ARHGAP40Q5TG30 622 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 NAIF1Q69YI7 327 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 ABLIM2Q6H8Q1 611 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 TCTN3Q6NUS6 607 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 RAB11FIP2Q7L804 512 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 POLNQ7Z5Q5 900 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 TMTC1Q8IUR5 882 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 CPOQ8IVL8 374 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 FUKQ8N0W3 1084 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 NME8Q8N427 588 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 SIMC1Q8NDZ2 872 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 CPT1CQ8TCG5 803 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 HERVK_113Q902F9 699 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 HIST1H2AAQ96QV6 131 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms